small change in tests
@@ -127,7 +127,8 @@ def test_seq_joint_reconstruction_correct():
for node in myTree.tree.find_clades():
if node.up is not None:
assert np.sum(node.sequence != node.ref_seq)==0
- print (node.name, str(np.sum(node.sequence != node.ref_seq)), len(node.mutations), node.mutations)
+ print("True sequence equals inferred sequence")
+ print (node.name, np.sum(node.sequence != node.ref_seq), len(node.mutations), node.mutations)
# prove the likelihood valu calculation is correct
LH = myTree.ancestral_likelihood()
