Copy over nacl.parm7 from ./prep when initializing the simulation
@@ -11,6 +11,7 @@ rm -Rf traj_segs$SFX seg_logs$SFX istates$SFX & disown %1
rm -f system.h5 west.h5 seg_logs.tar
mkdir seg_logs traj_segs istates
+cp prep/1_leap/nacl.parm7 amber_config/
cp prep/4_eq2/4_eq2.rst bstates/nacl_init.rst
BSTATE_ARGS="--bstate-file bstates/bstates.txt"
