adjust nbstripout warning and specify run from pymedphys
@@ -129,7 +129,6 @@ running
setx HOME "C:\Users\yourusername"
-
Follow the instructions at the following website to create and add an SSH key
to your GitLab account. You already have ssh built into cmder, so you can skip
the first steps of that tutorial.
@@ -144,16 +143,22 @@ prompted for a password.
git clone git@gitlab.com:pymedphys/pymedphys.git
cd pymedphys
-
This will download all of PyMedPhys to your local machine.
-Next is to install and set up nbstripout.
+.. WARNING::
+
+ nbstripout is used to make it so that you do not post Jupyter Notebook
+ outputs online. Depending on how you use notebooks these outputs may
+ contain private and/or sensitive information. Should you uninstall Python
+ it may be possible that nbstripout ends up disabled. Stay prudent, and
+ be extra cautious when working with sensitive information stored within
+ a notebook in a git repository.
Install the development version of PyMedPhys
--------------------------------------------
Begin by installing the online version of PyMedPhys so that you get all of its
-dependencies with conda:
+dependencies with conda. With cmder open and from the pymedphys directory:
.. code:: bash
@@ -161,18 +166,11 @@ dependencies with conda:
conda install pymedphys --only-deps
pip install -e .
-.. WARNING::
-
- nbstripout is used to make it so that you do not post Jupyter Notebook
- outputs online. Depending on how you use notebooks these outputs may
- contain private and/or sensitive information. Should you uninstall Python
- it may be possible that nbstripout ends up disabled. Stay prudent, and
- be extra cautious when working with sensitive information stored within
- a notebook in a git repository.
+Next is to install nbstripout.
.. code:: bash
- conda install -c conda-forge nbstripout
+ conda install nbstripout
Update this document
--------------------
