add missing input b to sstrip_orig_vol
@@ -55,7 +55,6 @@ quality-assessment-protocol/blob/master/qap/anatomical_preproc.py#L105>`_.
workflow.connect([
(inputnode, sstrip_orig_vol, [('in_file', 'in_file_a')]),
(inu_n4, sstrip, [('output_image', 'in_file')]),
- (sstrip, sstrip_orig_vol, [('out_file', 'in_file_b')]),
(sstrip_orig_vol, outputnode, [('out_file', 'out_file')]),
(inu_n4, outputnode, [('output_image', 'bias_corrected')]),
])
@@ -63,6 +62,7 @@ quality-assessment-protocol/blob/master/qap/anatomical_preproc.py#L105>`_.
# Remaining connections
workflow.connect([
+ (sstrip, sstrip_orig_vol, [('out_file', 'in_file_b')]),
(inputnode, inu_n4, [('in_file', 'input_image')]),
(sstrip_orig_vol, binarize, [('out_file', 'in_file')]),
(binarize, outputnode, [('out_file', 'out_mask')]),
