Use 1M peptides for calibration
@@ -31,6 +31,7 @@ time mhcflurry-class1-train-allele-specific-models \
--data "$(mhcflurry-downloads path data_curated)/curated_training_data.csv.bz2" \
--hyperparameters hyperparameters.yaml \
--out-models-dir models \
+ --percent-rank-calibration-num-peptides-per-length 1000000 \
--min-measurements-per-allele 100
cp $SCRIPT_ABSOLUTE_PATH .
