More attepted fixes
@@ -7,7 +7,7 @@ jobs:
runs-on: ubuntu-latest
defaults:
run:
- shell: bash
+ shell: bash -l {0}
strategy:
max-parallel: 5
# matrix:
@@ -28,9 +28,8 @@ jobs:
channel-priority: true
activate-environment: powergenome
environment-file: environment.yml
- auto-activate-base: false
+ # auto-activate-base: false
- run: |
- conda activate powergenome
conda info
conda list
conda config --show-sources
@@ -52,7 +51,7 @@ jobs:
pip install -e .
- name: Lint with flake8
run: |
- mamba install flake8
+ pip install flake8
# stop the build if there are Python syntax errors or undefined names
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
