adding defaults
@@ -147,14 +147,12 @@ strain_pars = ['beta',
'rel_death_prob',
]
-immunity_sources = [
- 'asymptomatic',
- 'mild',
- 'severe',
- 'vaccine'
-]
+# Immunity is broken down according to 3 axes, as listed here
immunity_axes = ['sus', 'trans', 'prog']
+# Immunity protection also varies according to the level of symptoms you had, differentiated by 3 levels:
+prior_symptoms = ['asymptomatic','mild','severe'] # TODO: align these with people.states?? Add vaccination??
+
# Default age data, based on Seattle 2018 census data -- used in population.py
default_age_data = np.array([
[ 0, 4, 0.0605],
