add Mink name adjustment
@@ -307,6 +307,11 @@ def read_metadata(metadata):
country = countries_to_division[country]
+ host = l[14]
+ if host == "Neovison vison" or host == "Mustela lutreola":
+ additions_to_annotation.append(strain + "\t" + id + "\thost\tMink # previously " + host)
+
+
if region not in data:
data[region] = {}
if country not in data[region]:
