add callpeak --cutoff-analysis to test script
@@ -30,7 +30,7 @@ echo "1.1 callpeak narrow"
mkdir ${TAG}_run_callpeak_narrow
-macs2 callpeak -g 52000000 -t $CHIP -c $CTRL -n run_callpeak_narrow0 -B --outdir ${TAG}_run_callpeak_narrow &> ${TAG}_run_callpeak_narrow/run_callpeak_narrow0.log
+macs2 callpeak -g 52000000 -t $CHIP -c $CTRL -n run_callpeak_narrow0 -B --outdir ${TAG}_run_callpeak_narrow --cutoff-analysis &> ${TAG}_run_callpeak_narrow/run_callpeak_narrow0.log
macs2 callpeak -g 52000000 -t $CHIP -c $CTRL -n run_callpeak_narrow1 -B --outdir ${TAG}_run_callpeak_narrow --d-min 15 --call-summits &> ${TAG}_run_callpeak_narrow/run_callpeak_narrow1.log
macs2 callpeak -g 52000000 -t $CHIP -c $CTRL -n run_callpeak_narrow2 -B --outdir ${TAG}_run_callpeak_narrow --nomodel --extsize 100 &> ${TAG}_run_callpeak_narrow/run_callpeak_narrow2.log
macs2 callpeak -g 52000000 -t $CHIP -c $CTRL -n run_callpeak_narrow3 -B --outdir ${TAG}_run_callpeak_narrow --nomodel --extsize 100 --shift -50 &> ${TAG}_run_callpeak_narrow/run_callpeak_narrow3.log
