path_or_url: A support function for handling local paths and remote URLs interchangeably
Uses Snakemake's existing support for remote files.
@@ -142,6 +142,7 @@ rule dump_config:
# Include small, shared functions that help build inputs and parameters.
include: "workflow/snakemake_rules/common.smk"
+include: "workflow/snakemake_rules/remote_files.smk"
# Include rules to handle primary build logic from multiple sequence alignment
# to output of auspice JSONs for a default build.
