Specify number of cores for snakemake jobs when they aren't already
All other references to "snakemake" use a profile that already includes a
`cores` specification. This commit fixes the one reference that does not already
have `--cores`, to make our docs compatible with the latest versions of
Snakemake which require `--cores`.
@@ -61,7 +61,7 @@ For the [`south-usa-sarscov2`](https://github.com/emmahodcroft/south-usa-sarscov
To run this, one would call the following from within `ncov`:
```bash
-ncov$ snakemake --profile ../south-usa-sarscov2/profiles/south-central/
+ncov$ snakemake --cores 1 --profile ../south-usa-sarscov2/profiles/south-central/
```
## [Previous Section: Preparing your data](data-prep.md)
