feat: translate everything with nextalign
@@ -1123,7 +1123,7 @@ rule logistic_growth:
rule mutational_fitness:
input:
tree = "results/{build_name}/tree.nwk",
- alignments = lambda w: rules.aa_muts_explicit.output.translations,
+ alignments = lambda w: rules.translate.output.translations,
distance_map = config["files"]["mutational_fitness_distance_map"]
output:
node_data = "results/{build_name}/mutational_fitness.json"
