fix missing output error when origin is null
@@ -115,7 +115,7 @@ if "use_nextalign" in config and config["use_nextalign"]:
outdir = "results/translations",
bin = config["nextalign_bin"],
genes = ','.join(config.get('genes', ['S'])),
- basename = "{origin}"
+ basename = lambda w: w.origin or "seqs"
log:
"logs/align{origin}.txt"
benchmark:
