remove use-gz as the file is read by kgtkreader
@@ -110,17 +110,7 @@ def add_arguments(parser: KGTKArgumentParser):
"rather than stopping. logging",
dest="warning",
)
- parser.add_argument(
- "-gz",
- "--use-gz",
- type=optional_bool,
- metavar="True|False",
- nargs='?',
- const=True,
- default=False,
- help="if set to yes, read from compressed gz file",
- dest="use_gz",
- )
+
parser.add_argument(
"-sid",
"--use-id",
