Show S1 mutations and frequencies in Auspice
Updates the default Auspice config to show S1 mutation, logistic growth,
and current frequency in the same order as the main Nextstrain builds
and also adds frequencies to the default panels to be shown to match
Nextstrain's builds.
"title": "GISAID Clade",
"type": "categorical"
},
+ {
+ "key": "S1_mutations",
+ "title": "S1 mutations",
+ "type": "continuous"
+ },
+ {
+ "key": "logistic_growth",
+ "title": "Logistic growth",
+ "type": "continuous"
+ },
+ {
+ "key": "current_frequency",
+ "title": "Current frequency",
+ "type": "continuous"
+ },
{
"key": "location",
"title": "Location",
"key": "region_exposure",
"title": "Region of exposure",
"type": "categorical"
- },
- {
- "key": "logistic_growth",
- "title": "Logistic growth",
- "type": "continuous"
- },
- {
- "key": "current_frequency",
- "title": "Current frequency",
- "type": "continuous"
}
],
"geo_resolutions": [
"panels": [
"tree",
"map",
- "entropy"
+ "entropy",
+ "frequencies"
]
}
