Update by ialbert on Wed Dec  6 11:49:13 EST 2017 from yolo.local
@@ -42,17 +42,16 @@ data: [
{
name: Published Giraffe Scaffold 2016.fa
- path: /export/data/giraffe/assembly/soap_assembly_k91_params.gapfilled.fa
- link: true
- data_type: FASTA_TYPE
+ value: /export/data/giraffe/assembly/soap_assembly_k91_params.gapfilled.f
+ type: FASTA
summary: The published assembled Giraffe scaffold (2016)
text: The giraffe scaffold assembled by Rayan Chiki
}
{
name: MA1_MP, Giraffe, DNA, Mate Pairs
- path: /export/data/giraffe/data/GIRAFFE/MA1_MP
- data_type: FASTQ_TYPE
+ value: /export/data/giraffe/data/GIRAFFE/MA1_MP
+ type: FASTQ
summary: MA1, 150bp, 2 x 78 million reads, 8x coverage
text: '''
Specimen ID: `MA1`
@@ -82,8 +81,8 @@ data: [
{
name: MA1_PE, Giraffe, DNA, Paired End
- path: /export/data/giraffe/data/GIRAFFE/MA1_PE
- data_type: FASTQ_TYPE
+ value: /export/data/giraffe/data/GIRAFFE/MA1_PE
+ type: FASTQ_TYPE
summary: MA1, 150bp, 2 x 285 million reads, 28x coverage
text: '''
Specimen ID: `MA1`
@@ -113,8 +112,8 @@ data: [
{
name: NZOO, Giraffe, DNA, Paired End
- path: /export/data/giraffe/data/GIRAFFE/NZOO
- data_type: FASTQ_TYPE
+ value: /export/data/giraffe/data/GIRAFFE/NZOO
+ type: FASTQ
summary: NZOO, 151bp, 4 x 22 million reads, 30x coverage
text: '''
Specimen ID: `NZOO`
@@ -140,8 +139,8 @@ data: [
{
name: UGA, Giraffe, DNA, Paired End
- path: /export/data/giraffe/data/GIRAFFE/UGA
- data_type: FASTQ_TYPE
+ value: /export/data/giraffe/data/GIRAFFE/UGA
+ type: FASTQ
summary: NZOO, 250bp, 2 x 333 million reads, 55x coverage
text: '''
Specimen ID: `UGA`
@@ -167,8 +166,8 @@ data: [
{
name: WOAK_PE, Okapi, DNA, Paired End
- path: /export/data/giraffe/data/OKAPI/WOAK_PE
- data_type: FASTQ_TYPE
+ value: /export/data/giraffe/data/OKAPI/WOAK_PE
+ type: FASTQ
summary: WOAK_PE, 150bp, 4 x 135 million reads, 27x coverage
text: '''
Specimen ID: `WOAK`
@@ -194,8 +193,8 @@ data: [
{
name: WOAK_MP, Okapi, DNA, Mate Pair
- path: /export/data/giraffe/data/OKAPI/WOAK_MP
- data_type: FASTQ_TYPE
+ value: /export/data/giraffe/data/OKAPI/WOAK_MP
+ type: FASTQ_TYPE
summary: WOAK_MP, 150bp, 2 x 67 million reads, 7x coverage
text: '''
Specimen ID: `WOAK`
