remove priority sampling from regional builds in gisaid profile
@@ -111,9 +111,6 @@ subsampling:
max_sequences: 600
sampling_scheme: "--probabilistic-sampling"
exclude: "--exclude-where 'region={region}'"
- priorities:
- type: "proximity"
- focus: "region_late"
region_late:
group_by: "division year month"
@@ -126,9 +123,6 @@ subsampling:
max_sequences: 1000
exclude: "--exclude-where 'region={region}'"
sampling_scheme: "--probabilistic-sampling"
- priorities:
- type: "proximity"
- focus: "region_late"
# Custom subsampling logic for global region.
nextstrain_region_global:
@@ -209,9 +203,6 @@ subsampling:
max_sequences: 1000
sampling_scheme: "--probabilistic-sampling"
exclude: "--exclude-where 'region={region}'"
- priorities:
- type: "proximity"
- focus: "region_late"
# Focal samples for region
region_early:
group_by: "country year month"
@@ -224,9 +215,6 @@ subsampling:
max_sequences: 500
sampling_scheme: "--probabilistic-sampling"
exclude: "--exclude-where 'region={region}'"
- priorities:
- type: "proximity"
- focus: "region_late"
# Define frequencies parameters.
frequencies:
