update install instructions to point to augur/auspice docs
@@ -16,9 +16,13 @@ git clone https://github.com/nextstrain/sarscov2-tutorial.git
## 2. Install augur [required for running analysis]
-Following [these instructions](XXX).
+You can find instructions for installing augur [here](https://nextstrain.org/docs/getting-started/introduction).
+
+Note there are many options for installing augur, including local installations from `conda`, `pip`, and from source, and container installation - take a minute to look at which may be best for you.
+
+If you are running Windows, we recommend working through Windows Subsystem for Linux (WSL) - you can find out how to set this up [here](https://nextstrain.org/docs/getting-started/windows-help).
## 3. Install auspice [required only for local visualization; web-based, no-install options available]
-Following [these instructions](XXX).
+You can find instructions for installing auspice [here](https://nextstrain.github.io/auspice/introduction/install).
