Add HDsort to installation list
@@ -32,10 +32,22 @@ Herdingspikes2
pip install herdingspikes
+HDSort
+-------
+
+* Matlab
+* Url: https://git.bsse.ethz.ch/hima_public/HDsort.git
+* Authors: Roland Diggelmann, Felix Franke
+* Installation::
+
+ git clone https://git.bsse.ethz.ch/hima_public/HDsort.git
+ # provide installation path by setting the HDSORT_PATH environment variable
+ # or using HDSortSorter.set_hdsort_path()
+
IronClust
---------
-* Matlab based
+* Matlab
* Url: https://github.com/jamesjun/ironclust
* Authors: James J. Jun
* Installation need Matlab::
@@ -47,7 +59,7 @@ IronClust
Kilosort
--------
-* Matlab based, needs cuda
+* Matlab, requires CUDA
* Url: https://github.com/cortex-lab/KiloSort
* Authors: Marius Pachitariu
* Installation needs Matlab and cudatoolkit::
@@ -61,10 +73,10 @@ Kilosort
Kilosort2
---------
-* Matlab based, needs cuda
+* Matlab, requires CUDA
* Url: https://github.com/MouseLand/Kilosort2
* Authors: Marius Pachitariu
-* Installation need Matlab and cudatoolkit::
+* Installation needs Matlab and cudatoolkit::
git clone https://github.com/MouseLand/Kilosort2
# provide installation path by setting the KILOSORT2_PATH environment variable
@@ -76,7 +88,7 @@ Kilosort2
Klusta
------
-* Python based
+* Python
* Url: https://github.com/kwikteam/klusta
* Authors: Cyrille Rossant, Shabnam Kadir, Dan Goodman, Max Hunter, Kenneth Harris
* Installation::
@@ -90,7 +102,7 @@ Klusta
Mountainsort4
-------------
-* Python based
+* Python
* Url: https://github.com/flatironinstitute/mountainsort
* Authors: Jeremy Magland, Alex Barnett, Jason Chung, Loren Frank, Leslie Greengard
* Installation::
@@ -101,7 +113,7 @@ Mountainsort4
SpykingCircus
-------------
-* Python based, needs MPICH installed
+* Python, requires MPICH
* Url: https://spyking-circus.readthedocs.io
* Authors: Pierre Yger, Olivier Marre
* Installation::
@@ -114,7 +126,7 @@ SpykingCircus
Tridesclous
-----------
-* Python based, runs faster with opencl installed but optional
+* Python, runs faster with opencl installed but optional
* Url: https://tridesclous.readthedocs.io
* Authors: Samuel Garcia, Christophe Pouzat
* Installation::
@@ -132,7 +144,7 @@ Tridesclous
Waveclus
--------
-* Matlab based
+* Matlab
* Url: https://github.com/csn-le/wave_clus/wiki
* Authors: Fernando Chaure, Hernan Rey and Rodrigo Quian Quiroga
* Installation needs Matlab::
