Remove build params redundant with defaults
Removes params that are already defaults in the workflow and do not need
to be in this config.
@@ -16,17 +16,9 @@ build_sizes:
small: 2000
xsmall: 1000
-
-refine:
- root: "Wuhan/WH01/2019"
-
files:
auspice_config: "nextstrain-profiles/nextstrain-open/auspice_config.json"
-genes: ["ORF1a", "ORF1b", "S", "ORF3a", "M", "N"]
-use_nextalign: true
-conda_environment: "workflow/envs/nextstrain_with_nextalign.yaml"
-
# NOTE for shepherds -- there are commented out inputs here, you can
# uncomment them to start the pipeline at that stage.
# E.g. if you uncomment `filtered` then the pipeline
