Fix Fix tutorial comment
Rename references to T4Lysozyme+p-xylene to host-guest.
@@ -761,7 +761,7 @@ part of a system.
.. doctest::
- >>> # Prepare the T4 Lysozyme + p-xylene system for alchemical modification.
+ >>> # Prepare the host-guest system for alchemical modification.
>>> guest_atoms = host_guest.mdtraj_topology.select('resname B2')
>>> alchemical_region = alchemy.AlchemicalRegion(alchemical_atoms=guest_atoms)
>>> factory = alchemy.AbsoluteAlchemicalFactory()
@@ -786,8 +786,8 @@ Finally, let's mix Monte Carlo and dynamics for propagation.
.. doctest::
>>> sequence_move = mcmc.SequenceMove(move_list=[
- ... mcmc.MCDisplacementMove(atom_subset=pxylene_atoms),
- ... mcmc.MCRotationMove(atom_subset=pxylene_atoms),
+ ... mcmc.MCDisplacementMove(atom_subset=guest_atoms),
+ ... mcmc.MCRotationMove(atom_subset=guest_atoms),
... mcmc.LangevinSplittingDynamicsMove(timestep=2.0*unit.femtoseconds, n_steps=n_steps,
... reassign_velocities=True, n_restart_attempts=6)
... ])
