add scvi-tools recipe
+{% set name = "scvi-tools" %}
+{% set version = "0.12.1" %}
+package:
+ name: "{{ name|lower }}"
+ version: "{{ version }}"
+
+source:
+ url: https://pypi.io/packages/source/{{ name[0] }}/{{ name }}/{{ name }}-{{ version }}.tar.gz
+ sha256: 20de3a692e56981d01986a4af1f2669b00588a9d98296b53a4d853c56762cb5d
+
+build:
+ number: 0
+ script: "{{ PYTHON }} -m pip install . -vv "
+ noarch: python
+
+requirements:
+ host:
+ - python >=3.7.2
+ - poetry >=1.0.9
+ - poetry-core
+ - pip >=19.0
+ run:
+ - anndata >=0.7.5
+ - poetry >=1.0.9
+ - pyro-ppl >=1.6.0
+ - h5py >=2.9.0
+ - ipywidgets >=7.5.1
+ - numba >=0.41.0
+ - numpy >=1.17.0
+ - openpyxl >=3.0
+ - pandas >=1.0
+ - python >=3.7.2
+ - rich >=9.12.4
+ - scikit-learn >=0.21.2
+ - toml >=0.10.1
+ - pytorch >=1.8.0
+ - pytorch-lightning >=1.3,<1.4
+ - tqdm >=4.56.0
+ - typing-extensions >=3.7.4 # [py37]
+ - importlib-metadata >=2.0 # [py37]
+
+test:
+ imports:
+ - scvi
+ - scvi.model
+ - scvi.nn
+ - scvi.train
+ - scvi.external
+ - scvi.dataloaders
+ - scvi.data
+ - scvi.distributions
+ requires:
+ - pytest
+
+about:
+ home: https://scvi-tools.org/
+ license: BSD-3-Clause
+ license_family: BSD
+ license_file: LICENSE
+ summary: Deep probabilistic analysis of single-cell omics data.
+ doc_url: https://docs.scvi-tools.org/en/stable/
+ dev_url: https://github.com/YosefLab/scvi-tools
+
+extra:
+ recipe-maintainers:
+ - romain-lopez
+ - adamgayoso
+ - galenxing
