text:
### A Pluto.jl notebook ###
# v0.19.3

using Markdown
using InteractiveUtils

# This Pluto notebook uses @bind for interactivity. When running this notebook outside of Pluto, the following 'mock version' of @bind gives bound variables a default value (instead of an error).
macro bind(def, element)
    quote
        local iv = try Base.loaded_modules[Base.PkgId(Base.UUID("6e696c72-6542-2067-7265-42206c756150"), "AbstractPlutoDingetjes")].Bonds.initial_value catch; b -> missing; end
        local el = $(esc(element))
        global $(esc(def)) = Core.applicable(Base.get, el) ? Base.get(el) : iv(el)
        el
    end
end

# ╔═╡ 8e7ec382-c738-11ec-3aae-b50d60f15c4f
begin
	using PlutoUI
	using CSV
	using DataFrames
	using Images
	using ImageBinarization
	using Colors
	using Plots
	using Printf
	using Interpolations
	using QuadGK
	using Markdown
	using InteractiveUtils
	using LsqFit
	using Statistics
	using StatsBase
	using Unitful
	using UnitfulEquivalences
	using PhysicalConstants
	using Peaks
	using FFTW
	using DSP
	import Glob

end

# ╔═╡ 06b8ed45-43bc-464f-89c0-dc0406312b81
import Unitful:
    nm, μm, mm, cm, m, km,
    mg, g, kg,
    ps, ns, μs, ms, s, minute, hr, d, yr, Hz, kHz, MHz, GHz,
    eV,
    μJ, mJ, J,
	μW, mW, W,
    A, N, mol, mmol, V, L, M

# ╔═╡ 8833b198-03e4-4679-8949-0c76546cb847
function ingredients(path::String)
	# this is from the Julia source code (evalfile in base/loading.jl)
	# but with the modification that it returns the module instead of the last object
	name = Symbol(basename(path))
	m = Module(name)
	Core.eval(m,
        Expr(:toplevel,
             :(eval(x) = $(Expr(:core, :eval))($name, x)),
             :(include(x) = $(Expr(:top, :include))($name, x)),
             :(include(mapexpr::Function, x) = $(Expr(:top, :include))(mapexpr, $name, x)),
             :(include($path))))
	m
end

# ╔═╡ 6163ba69-1237-4b49-988e-9a73cfef67f6
lfi = ingredients("../src/LaserLab.jl")

# ╔═╡ 5edc41bc-b912-44bf-9be5-a013f27a75ab
PlutoUI.TableOfContents(title="Laser Lab CMOS analysis", indent=true)

# ╔═╡ c9aaf1cc-80c4-475b-8a81-e00918d91b1e
md"""
# Analysis for a single point
"""

# ╔═╡ 7ce42aec-b319-4de9-b70c-84046d45a600
md"""
## Filters
"""

# ╔═╡ 58269465-ba8c-4840-bbfc-0a27897f3e2a
md"""
### Filter central value in nm
"""

# ╔═╡ 0b1c5662-ec4f-486e-9ee6-7fa6ba953e45
begin
	xfnm = [420.0,438.0,465.0,503.0,550.0,600.0,650.0,692.0,732.0,810.0]
	wfnm = [10.0, 24.0, 30.0, 40.0, 49.0, 52.0, 60.0, 40.0, 68.0, 10.0]
	filtnm = (center=xfnm,
	width  = wfnm,
	left = xfnm .- 0.5*wfnm,
	right = xfnm .+ 0.5*wfnm)

	println("Filter central values (nm) = ", filtnm.center, " width (nm) =", filtnm.width)
end

# ╔═╡ b98ad447-6055-46e5-bb4f-9e67f9c3176a
md"""
## Conversion factors
"""

# ╔═╡ 88853edb-dc1f-4e7a-a0ba-1868276d1ada
begin
	texp = 10.0
	adctopes = 0.48
	md"""
- Time of exposition (in sec) = $texp
- adc to photoelect = $adctopes
"""
end

# ╔═╡ f6dcfbd5-8416-42f5-b029-c794f92ee413
nsigma=5.0

# ╔═╡ dde07319-e6a0-48ac-94d6-92e0fda4df41
md"""
## Cutoff around maximum (number of sigmas in terms or rms of the dark current)
- nsigma = $nsigma
"""

# ╔═╡ 57d96432-4318-4291-8255-bfa5d6d3635c
md"""
## Define Experiment, run and point
"""

# ╔═╡ 0b4d2c08-a677-492c-b5da-982d3d5096fc
begin
	cmdir ="/Users/jj/JuliaProjects/LaserLab/labdata/CMOS"
	odir  = "/Users/jj/JuliaProjects/LaserLab/data/CMOS"
	dfiles ="*.csv"
	dplots ="*.png"
	dmtype = ["Imag","Dark"]
	md"""
	CMOS dir = $cmdir
	"""
end

# ╔═╡ e87f48e3-5e5a-44d5-83de-c520e522e33a
let
	dirs = lfi.LaserLab.getbolddirs(cmdir)
	md""" Select experiment : $(@bind sexp Select(dirs))"""
end

# ╔═╡ a759ecf7-7373-46bf-ab15-df39cbfa6814
begin
	namex = split(sexp,"_")
	csvdir = joinpath(odir, string(namex[1], namex[2]),"csv")
	pngdir = joinpath(odir, string(namex[1], namex[2]),"png")
	md"""
	- csv dir = $csvdir
	- png dir = $pngdir
	"""
end

# ╔═╡ 50ea2ecc-970f-4630-8c7e-acf5e69cc4c9
let
	path = joinpath(cmdir,sexp)
	dirs = lfi.LaserLab.getbolddirs(path)
	md""" Select run : $(@bind srun Select(dirs))"""
end

# ╔═╡ 4a1c449f-2656-4f05-9bea-783a3c7a4d30
begin
	ppath = joinpath(cmdir,sexp,srun)
	pdirs = lfi.LaserLab.getbolddirs(ppath)
	spdirs = sort(parse.(Int64, [split(pd, "Point")[2] for pd in pdirs]))
	sspdirs = [string("Point", string(i)) for i in spdirs]
	md""" Select point : $(@bind spoint Select(sspdirs))"""
end

# ╔═╡ ca7f4536-7e24-41cf-9944-356ca5663a4c
sspdirs

# ╔═╡ 5f8c988c-4567-490c-bd0b-a16001cab48c
spoint

# ╔═╡ df94ef34-08c9-4711-ae16-b024cf84b82a
md"""
## Define repetition, filter and image type
"""

# ╔═╡ 479f8f86-372c-4b91-9f73-e57a85d3d194
begin
	xpath = joinpath(cmdir,sexp,srun, spoint)
	xfiles = Glob.glob(dfiles, xpath)
	nxfiles = string.([split(f,"/")[end] for f in xfiles])
	rn = lfi.LaserLab.findpattern(nxfiles, "rep")
	md""" Select repetition number: $(@bind srn Select(rn))"""
end

# ╔═╡ 05bfacd2-047e-4491-a168-96120d394a83
typeof(xfiles)

# ╔═╡ 0b162778-31bd-4066-a576-4066acf0c370
typeof(nxfiles)

# ╔═╡ f13173e1-088c-4f5c-ae6a-f9aebcd6bc57
begin
	xfa = lfi.LaserLab.findpattern(nxfiles, "Filter")
	xfb = sort(parse.(Int64, xfa))
	xfn = string.(xfb)
	md""" Select filter: $(@bind sfn Select(xfn))"""
end

# ╔═╡ b19277b6-bdbc-46ce-ab18-d50e08fae24a
md""" Select Img/dark: $(@bind wid Select(dmtype))"""

# ╔═╡ d762313e-1466-4724-9c35-dd89e657a11c
begin
	setup = lfi.LaserLab.Setup(cmdir,
		                       string(sexp), string(srun), string(spoint),
		                       string(sfn),  string(srn),  string(wid), texp,
							   "before", "Filter", "rep", "Imag_1", "Dark",
                               string("ExpoT_",string(Int64(texp)),"s"),
							   ".csv", ".png")

	pngpath = joinpath(pngdir,lfi.LaserLab.get_outpath(setup, "png"))
	md"""
	Setup
	- root dir = $(setup.cmdir)
	- Series = $(setup.series)
	- Measurement = $(setup.measurement)
	- Point = $(setup.point)
	- Filter = $(setup.filter)
	- Repetition = $(setup.rep)
	- Img/Dark = $(setup.imgid)
	- Time exposition = $(setup.texpsec)

	Grammar

	- stype = $(setup.darktype)
	- Filter = $(setup.sfilter)
	- Repetition = $(setup.srep)
	- Img = $(setup.img)
	- Dark = $(setup.dark)
	- Time exposition = $(setup.exp)
	- File extensions = $(setup.fext)
	- png extensions = $(setup.pext)

	Paths
	- png = $pngdir
	"""
end

# ╔═╡ 7e185082-f3bf-4d95-9d5d-57101f47a684
md"""
## Select image

- Image in the left not corrected
- Image in the right corrected (dark current subtracted)
"""

# ╔═╡ 4760fdb6-5a0b-4ba2-89b7-0cc7f764d68e
begin
	image = lfi.LaserLab.select_image(xfiles, setup, setup.imgid)
	cimg = lfi.LaserLab.get_corrected_image(xfiles, setup)
	mosaicview(Gray.(image.imgn), Gray.(cimg.imgn); nrow = 1)
end

# ╔═╡ 8467180b-dd7a-4e99-931a-cbb87af90fc2
let
	spngn = string(setup.series, "_", setup.measurement, "_",
		           setup.point,  "_Filter_", setup.filter, "_imageCMOS.png")
	pxth = joinpath(pngdir, spngn)
	save(pxth, colorview(Gray, map(clamp01nan, cimg.imgn) ))
end

# ╔═╡ cdf03376-4450-4b71-a820-33564d1ed71d
begin
	imgmax, imgpos = lfi.LaserLab.signal_around_maximum(cimg.img, cimg.dark; nsigma=nsigma)
	Gray.(imgmax.imgn)
end

# ╔═╡ 986b6b9e-3a02-4703-91d0-8088a8066810
let
	spngn = string(setup.series, "_", setup.measurement, "_",
		           setup.point,  "_Filter_", setup.filter, "_imageZoomCMOS.png")
	pxth = joinpath(pngdir, spngn)
	save(pxth, colorview(Gray, map(clamp01nan, imgmax.imgn) ))
end

# ╔═╡ aba1623c-1fd1-4210-b587-a76e21522397
begin
	stot = sum(imgmax.img)
md"""
- Size of the image =$(size(imgmax.img))
- Total sum around the peak = $(round(stot, sigdigits=3))
- value of max = $(imgpos.max)
- position of max: i = $(imgpos.imax)  j = $(imgpos.jmax)
"""
end

# ╔═╡ e9e8e58a-e1db-49f1-8429-420271fb1852
md"""
## Comparison between spectrum computed around maximum and using the full camera.

- Notice the umphysical shoulder when using the full camera
"""

# ╔═╡ d5540947-8b91-4cba-9738-c707e9945eab
begin
	sdf = lfi.LaserLab.spectrum_max(xfiles, setup, xfn, filtnm, adctopes; nsigma=3.0)

	plot(sdf.cflt, sdf.sumpes, lw=2, label=setup.point, title="Spectrum around maximum")
	scatter!(sdf.cflt, sdf.sumpes, label="")
	xlabel!("λ (nm)")
	ylabel!("pes")
end

# ╔═╡ af081fae-01f0-44ce-9f40-9cb5d3f28695
setup

# ╔═╡ 6325910e-b376-42ab-962a-28f749bc27b2
begin
	sdf2 = lfi.LaserLab.spectrum_sum(xfiles, setup,  xfn, filtnm, adctopes)
	plot(sdf2.cflt, sdf2.sumpes, lw=2, label=setup.point, title="spectrum full CMOS")
	scatter!(sdf2.cflt, sdf2.sumpes, label="")
	xlabel!("λ (nm)")
	ylabel!("pes")
end

# ╔═╡ a90c8edc-1405-4a8c-aacf-53cd130910ae
setup

# ╔═╡ 56ccf00b-8797-4347-b4e9-026a9da14a81
setup.point

# ╔═╡ a48af8f4-4ed2-45cd-b4e8-9b3106c885f3
md"""
# Analysis for al points
"""

# ╔═╡ 1794afb6-6ef0-46d6-b182-d54362b9a07d
md""" Check to carry analysis for all points: $(@bind zrec CheckBox())"""

# ╔═╡ 25219398-6903-4cb0-a336-127eedbfa902
if zrec
	lfi.LaserLab.spectrum_max_allpoints!(setup, sspdirs, xfn,
		                                 filtnm, adctopes;
                                         nsigma=nsigma, odir=csvdir, etype="csv")
end

# ╔═╡ 82ddd81b-8aea-4711-97d9-a645121786f8
md""" Check to read and plot data for all points: $(@bind zread CheckBox())"""

# ╔═╡ 0d8e9320-ae68-461f-87a5-8563010a930e
spngn = string(setup.series, "_", setup.measurement, ".png")

# ╔═╡ 20b26dae-9bc4-474e-9b2d-c397f6305a96
joinpath(pngdir, spngn)

# ╔═╡ c1b2cf36-d72e-4348-911e-8e44f1834ae4
md"""
# Functions
"""

# ╔═╡ 9ad17eec-bb5c-4980-9c32-27e01c5b7fcf
function plot_spectrum_for_point(sdfp, pt, fscale="cflt", escale="sumpes")
	plt = plot(sdfp[!, fscale], sdfp[!, escale], lw=2, label=pt,
		       xtickfontsize=8,ytickfontsize=8)
	scatter!(sdfp[!, fscale], sdfp[!, escale], label="")
	xlabel!("λ (nm)")
	ylabel!("pes")
	yticks!([2e+5,4e+5,6e+5])
    xticks!([0,400,600,800])

	#xtickfontsize=18,ytickfontsize=18,xlabel="wavelength",xguidefontsize=18,yscale=:log10,ylabel="flux",yguidefontsize=18,legendfontsize=18) here

	plt
end

# ╔═╡ 1f1b334e-941b-4fbd-b964-b4c098ef3231
if zread
	dfdict = lfi.LaserLab.spectrum_fromfile_allpoints(setup, sspdirs, csvdir);
	PLT=[]
	for pt in sspdirs
		sdfp = dfdict[pt]
		push!(PLT, plot_spectrum_for_point(sdfp, pt, "cflt"))
	end
	pall = plot(size=(750,750), PLT[1:end-1]..., layout=(3,3), titlefontsize=8)

end

# ╔═╡ f8b65718-3e1b-454a-817f-1e78feb43225
if zread
	let
		spngn = string(setup.series, "_", setup.measurement, ".png")
		pxth = joinpath(pngdir, spngn)
		png(pall, pxth)
	end
end

# ╔═╡ 00000000-0000-0000-0000-000000000001
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deps = ["REPL"]
git-tree-sha1 = "53915e50200959667e78a92a418594b428dffddf"
uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1"
version = "0.4.1"

[[deps.Unitful]]
deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"]
git-tree-sha1 = "b649200e887a487468b71821e2644382699f1b0f"
uuid = "1986cc42-f94f-5a68-af5c-568840ba703d"
version = "1.11.0"

[[deps.UnitfulEquivalences]]
deps = ["Unitful"]
git-tree-sha1 = "76fc2f7fdc87531a1018eb7d647df7c29daf36b7"
uuid = "da9c4bc3-91c8-4f02-8a40-6b990d2a7e0c"
version = "0.2.0"

[[deps.Unzip]]
git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670"
uuid = "41fe7b60-77ed-43a1-b4f0-825fd5a5650d"
version = "0.1.2"

[[deps.Wayland_jll]]
deps = ["Artifacts", "Expat_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg", "XML2_jll"]
git-tree-sha1 = "3e61f0b86f90dacb0bc0e73a0c5a83f6a8636e23"
uuid = "a2964d1f-97da-50d4-b82a-358c7fce9d89"
version = "1.19.0+0"

[[deps.Wayland_protocols_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "4528479aa01ee1b3b4cd0e6faef0e04cf16466da"
uuid = "2381bf8a-dfd0-557d-9999-79630e7b1b91"
version = "1.25.0+0"

[[deps.WeakRefStrings]]
deps = ["DataAPI", "InlineStrings", "Parsers"]
git-tree-sha1 = "b1be2855ed9ed8eac54e5caff2afcdb442d52c23"
uuid = "ea10d353-3f73-51f8-a26c-33c1cb351aa5"
version = "1.4.2"

[[deps.WoodburyMatrices]]
deps = ["LinearAlgebra", "SparseArrays"]
git-tree-sha1 = "de67fa59e33ad156a590055375a30b23c40299d3"
uuid = "efce3f68-66dc-5838-9240-27a6d6f5f9b6"
version = "0.5.5"

[[deps.XML2_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "Zlib_jll"]
git-tree-sha1 = "1acf5bdf07aa0907e0a37d3718bb88d4b687b74a"
uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a"
version = "2.9.12+0"

[[deps.XSLT_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"]
git-tree-sha1 = "91844873c4085240b95e795f692c4cec4d805f8a"
uuid = "aed1982a-8fda-507f-9586-7b0439959a61"
version = "1.1.34+0"

[[deps.Xorg_libX11_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libxcb_jll", "Xorg_xtrans_jll"]
git-tree-sha1 = "5be649d550f3f4b95308bf0183b82e2582876527"
uuid = "4f6342f7-b3d2-589e-9d20-edeb45f2b2bc"
version = "1.6.9+4"

[[deps.Xorg_libXau_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "4e490d5c960c314f33885790ed410ff3a94ce67e"
uuid = "0c0b7dd1-d40b-584c-a123-a41640f87eec"
version = "1.0.9+4"

[[deps.Xorg_libXcursor_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXfixes_jll", "Xorg_libXrender_jll"]
git-tree-sha1 = "12e0eb3bc634fa2080c1c37fccf56f7c22989afd"
uuid = "935fb764-8cf2-53bf-bb30-45bb1f8bf724"
version = "1.2.0+4"

[[deps.Xorg_libXdmcp_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "4fe47bd2247248125c428978740e18a681372dd4"
uuid = "a3789734-cfe1-5b06-b2d0-1dd0d9d62d05"
version = "1.1.3+4"

[[deps.Xorg_libXext_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"]
git-tree-sha1 = "b7c0aa8c376b31e4852b360222848637f481f8c3"
uuid = "1082639a-0dae-5f34-9b06-72781eeb8cb3"
version = "1.3.4+4"

[[deps.Xorg_libXfixes_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"]
git-tree-sha1 = "0e0dc7431e7a0587559f9294aeec269471c991a4"
uuid = "d091e8ba-531a-589c-9de9-94069b037ed8"
version = "5.0.3+4"

[[deps.Xorg_libXi_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXext_jll", "Xorg_libXfixes_jll"]
git-tree-sha1 = "89b52bc2160aadc84d707093930ef0bffa641246"
uuid = "a51aa0fd-4e3c-5386-b890-e753decda492"
version = "1.7.10+4"

[[deps.Xorg_libXinerama_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXext_jll"]
git-tree-sha1 = "26be8b1c342929259317d8b9f7b53bf2bb73b123"
uuid = "d1454406-59df-5ea1-beac-c340f2130bc3"
version = "1.1.4+4"

[[deps.Xorg_libXrandr_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll"]
git-tree-sha1 = "34cea83cb726fb58f325887bf0612c6b3fb17631"
uuid = "ec84b674-ba8e-5d96-8ba1-2a689ba10484"
version = "1.5.2+4"

[[deps.Xorg_libXrender_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"]
git-tree-sha1 = "19560f30fd49f4d4efbe7002a1037f8c43d43b96"
uuid = "ea2f1a96-1ddc-540d-b46f-429655e07cfa"
version = "0.9.10+4"

[[deps.Xorg_libpthread_stubs_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "6783737e45d3c59a4a4c4091f5f88cdcf0908cbb"
uuid = "14d82f49-176c-5ed1-bb49-ad3f5cbd8c74"
version = "0.1.0+3"

[[deps.Xorg_libxcb_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "XSLT_jll", "Xorg_libXau_jll", "Xorg_libXdmcp_jll", "Xorg_libpthread_stubs_jll"]
git-tree-sha1 = "daf17f441228e7a3833846cd048892861cff16d6"
uuid = "c7cfdc94-dc32-55de-ac96-5a1b8d977c5b"
version = "1.13.0+3"

[[deps.Xorg_libxkbfile_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"]
git-tree-sha1 = "926af861744212db0eb001d9e40b5d16292080b2"
uuid = "cc61e674-0454-545c-8b26-ed2c68acab7a"
version = "1.1.0+4"

[[deps.Xorg_xcb_util_image_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"]
git-tree-sha1 = "0fab0a40349ba1cba2c1da699243396ff8e94b97"
uuid = "12413925-8142-5f55-bb0e-6d7ca50bb09b"
version = "0.4.0+1"

[[deps.Xorg_xcb_util_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libxcb_jll"]
git-tree-sha1 = "e7fd7b2881fa2eaa72717420894d3938177862d1"
uuid = "2def613f-5ad1-5310-b15b-b15d46f528f5"
version = "0.4.0+1"

[[deps.Xorg_xcb_util_keysyms_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"]
git-tree-sha1 = "d1151e2c45a544f32441a567d1690e701ec89b00"
uuid = "975044d2-76e6-5fbe-bf08-97ce7c6574c7"
version = "0.4.0+1"

[[deps.Xorg_xcb_util_renderutil_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"]
git-tree-sha1 = "dfd7a8f38d4613b6a575253b3174dd991ca6183e"
uuid = "0d47668e-0667-5a69-a72c-f761630bfb7e"
version = "0.3.9+1"

[[deps.Xorg_xcb_util_wm_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xcb_util_jll"]
git-tree-sha1 = "e78d10aab01a4a154142c5006ed44fd9e8e31b67"
uuid = "c22f9ab0-d5fe-5066-847c-f4bb1cd4e361"
version = "0.4.1+1"

[[deps.Xorg_xkbcomp_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libxkbfile_jll"]
git-tree-sha1 = "4bcbf660f6c2e714f87e960a171b119d06ee163b"
uuid = "35661453-b289-5fab-8a00-3d9160c6a3a4"
version = "1.4.2+4"

[[deps.Xorg_xkeyboard_config_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xkbcomp_jll"]
git-tree-sha1 = "5c8424f8a67c3f2209646d4425f3d415fee5931d"
uuid = "33bec58e-1273-512f-9401-5d533626f822"
version = "2.27.0+4"

[[deps.Xorg_xtrans_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "79c31e7844f6ecf779705fbc12146eb190b7d845"
uuid = "c5fb5394-a638-5e4d-96e5-b29de1b5cf10"
version = "1.4.0+3"

[[deps.Zlib_jll]]
deps = ["Libdl"]
uuid = "83775a58-1f1d-513f-b197-d71354ab007a"

[[deps.Zstd_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "e45044cd873ded54b6a5bac0eb5c971392cf1927"
uuid = "3161d3a3-bdf6-5164-811a-617609db77b4"
version = "1.5.2+0"

[[deps.libass_jll]]
deps = ["Artifacts", "Bzip2_jll", "FreeType2_jll", "FriBidi_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"]
git-tree-sha1 = "5982a94fcba20f02f42ace44b9894ee2b140fe47"
uuid = "0ac62f75-1d6f-5e53-bd7c-93b484bb37c0"
version = "0.15.1+0"

[[deps.libblastrampoline_jll]]
deps = ["Artifacts", "Libdl", "OpenBLAS_jll"]
uuid = "8e850b90-86db-534c-a0d3-1478176c7d93"

[[deps.libfdk_aac_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "daacc84a041563f965be61859a36e17c4e4fcd55"
uuid = "f638f0a6-7fb0-5443-88ba-1cc74229b280"
version = "2.0.2+0"

[[deps.libpng_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"]
git-tree-sha1 = "94d180a6d2b5e55e447e2d27a29ed04fe79eb30c"
uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f"
version = "1.6.38+0"

[[deps.libsixel_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "78736dab31ae7a53540a6b752efc61f77b304c5b"
uuid = "075b6546-f08a-558a-be8f-8157d0f608a5"
version = "1.8.6+1"

[[deps.libvorbis_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"]
git-tree-sha1 = "b910cb81ef3fe6e78bf6acee440bda86fd6ae00c"
uuid = "f27f6e37-5d2b-51aa-960f-b287f2bc3b7a"
version = "1.3.7+1"

[[deps.nghttp2_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d"

[[deps.p7zip_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0"

[[deps.x264_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "4fea590b89e6ec504593146bf8b988b2c00922b2"
uuid = "1270edf5-f2f9-52d2-97e9-ab00b5d0237a"
version = "2021.5.5+0"

[[deps.x265_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "ee567a171cce03570d77ad3a43e90218e38937a9"
uuid = "dfaa095f-4041-5dcd-9319-2fabd8486b76"
version = "3.5.0+0"

[[deps.xkbcommon_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Wayland_jll", "Wayland_protocols_jll", "Xorg_libxcb_jll", "Xorg_xkeyboard_config_jll"]
git-tree-sha1 = "ece2350174195bb31de1a63bea3a41ae1aa593b6"
uuid = "d8fb68d0-12a3-5cfd-a85a-d49703b185fd"
version = "0.9.1+5"
"""

# ╔═╡ Cell order:
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# ╟─00000000-0000-0000-0000-000000000001
# ╟─00000000-0000-0000-0000-000000000002

max_stars_repo_name: jjgomezcadenas/laserlab

max_issues_repo_name: jjgomezcadenas/laserlab

max_forks_repo_name: jjgomezcadenas/laserlab


text:
function ThomasLUSolve(A::Any,B::Vector)
      #A = the matrix of coefficients 'A' must be squared
  #B = The Vector 'B' right hand side vector Vertical
    m,n =size(A)
    v = size(B,1)
    if m != n
        error("Matrix must be squared")
    elseif m != v
        error("Vector Length must be equal to Matrix")
    end
    e=zeros(m-1)
    f=zeros(m)
    g=zeros(m-1)
    r=zeros(m)
    x=zeros(m)
    f[1]=A[1,1]
        #Decomposition
    for i=2:m
        e[i-1]=A[i,i-1]/f[i-1]
        g[i-1]=A[i-1,i]
        f[i]=A[i,i]-e[i-1]*g[i-1]

    end

    #Fordward Substitution
    r[1]=B[1]
    for i=2:m
        r[i]=B[i]-e[i-1]*r[i-1]
    end

    #Back Substitution
    x[m]=r[m]/f[m]

    for i=m-1:-1:1
       x[i]=(r[i]-g[i]*x[i+1])/f[i]
    end

    return x
end

ext: jl


text:
@testset "Lexical" begin
    evaluate(s) = collect(L.tokens(L.State(IOBuffer(s))))

    L = Lexical

    @testset "Lexical/Empty String" begin
        @test evaluate("") == [ ]
    end

    @testset "Lexical/Single Tokens (Single Character)" begin
        @test evaluate("[")  == [ L.Token(L.dso, "[", L.Location("a buffer", -1)) ]
        @test evaluate("]")  == [ L.Token(L.dsc, "]", L.Location("a buffer", -1)) ]
        @test evaluate("\"") == [ L.Token(L.lit, "\"", L.Location("a buffer", -1)) ]
        @test evaluate("'")  == [ L.Token(L.lita, "'", L.Location("a buffer", -1)) ]
        @test evaluate("(")  == [ L.Token(L.grpo, "(", L.Location("a buffer", -1)) ]
        @test evaluate(")")  == [ L.Token(L.grpc, ")", L.Location("a buffer", -1)) ]
        @test evaluate("|")  == [ L.Token(L.or, "|", L.Location("a buffer", -1)) ]
        @test evaluate(",")  == [ L.Token(L.seq, ",", L.Location("a buffer", -1)) ]
        @test evaluate("?")  == [ L.Token(L.opt, "?", L.Location("a buffer", -1)) ]
        @test evaluate("*")  == [ L.Token(L.rep, "*", L.Location("a buffer", -1)) ]
        @test evaluate("+")  == [ L.Token(L.plus, "+", L.Location("a buffer", -1)) ]
        @test evaluate("-")  == [ L.Token(L.text, "-", L.Location("a buffer", -1)) ]
        @test evaluate("&")  == [ L.Token(L.ero, "&", L.Location("a buffer", -1)) ]
        @test evaluate("%")  == [ L.Token(L.pero, "%", L.Location("a buffer", -1)) ]
        @test evaluate(";")  == [ L.Token(L.refc, ";", L.Location("a buffer", -1)) ]
        @test evaluate("<")  == [ L.Token(L.stago, "<", L.Location("a buffer", -1)) ]
        @test evaluate(">")  == [ L.Token(L.tagc, ">", L.Location("a buffer", -1)) ]
        @test evaluate("/")  == [ L.Token(L.net, "/", L.Location("a buffer", -1)) ]
        @test evaluate("=")  == [ L.Token(L.vi, "=", L.Location("a buffer", -1)) ]
    end

    @testset "Lexical/Single Tokens (Two Character)" begin
        @test evaluate("<!") == [ L.Token(L.mdo, "<!", L.Location("a buffer", -1)) ]
        @test evaluate("]]") == [ L.Token(L.msc, "]]", L.Location("a buffer", -1)) ]
        @test evaluate("--") == [ L.Token(L.com, "--", L.Location("a buffer", -1)) ]
        @test evaluate("&#") == [ L.Token(L.cro, "&#", L.Location("a buffer", -1)) ]
        @test evaluate("<?") == [ L.Token(L.pio, "<?", L.Location("a buffer", -1)) ]
        @test evaluate("</") == [ L.Token(L.etago, "</", L.Location("a buffer", -1)) ]
    end

    @testset "Lexical/Troublesome Tokens (Illegal Character)" begin
        # Might as well try them all ... this doesn't take long.
        #
        for character ∈ vcat('\u00':'\u08', '\u0e':'\u1f', '\ud800':'\udfff', [ '\u0b', '\u0c', '\ufffe', '\uffff' ])
            @test evaluate(string(character)) == [ L.Token(L.illegal, string(character), L.Location("a buffer", -1)) ]
        end
    end

    @testset "Lexical/Troublesome Tokens (One Character)" begin
        @test evaluate("#") == [ L.Token(L.text, "#", L.Location("a buffer", -1)) ]
    end

    @testset "Lexical/Troublesome Tokens (Two Character)" begin
        @test evaluate("?>") == [ L.Token(L.opt, "?", L.Location("a buffer", -1)),
                                  L.Token(L.tagc, ">", L.Location("a buffer", -1)) ]
    end

    @testset "Lexical/Single Tokens (Basic Text)" begin
        @test evaluate("a")   == [ L.Token(L.text, "a", L.Location("a buffer", -1)) ]
        @test evaluate("ab")  == [ L.Token(L.text, "ab", L.Location("a buffer", -1)) ]
        @test evaluate("abc") == [ L.Token(L.text, "abc", L.Location("a buffer", -1)) ]
        @test evaluate("∈")   == [ L.Token(L.text, "∈", L.Location("a buffer", -1)) ]
        @test evaluate("a∈")  == [ L.Token(L.text, "a∈", L.Location("a buffer", -1)) ]
        @test evaluate("∈b")  == [ L.Token(L.text, "∈b", L.Location("a buffer", -1)) ]
        @test evaluate("a∈b") == [ L.Token(L.text, "a∈b", L.Location("a buffer", -1)) ]
    end

    @testset "Lexical/Single Tokens (White Space)" begin
        @test evaluate("\u20")         == [ L.Token(L.ws, "\u20", L.Location("a buffer", -1)) ]
        @test evaluate(" ")            == [ L.Token(L.ws, "\u20", L.Location("a buffer", -1)) ]
        @test evaluate("\u09")         == [ L.Token(L.ws, "\u09", L.Location("a buffer", -1)) ]
        @test evaluate("	")     == [ L.Token(L.ws, "\u09", L.Location("a buffer", -1)) ]
        @test evaluate("\t")           == [ L.Token(L.ws, "\u09", L.Location("a buffer", -1)) ]
        @test evaluate("\u0a")         == [ L.Token(L.ws, "\u0a", L.Location("a buffer", -1)) ]
        @test evaluate("\u0d")         == [ L.Token(L.ws, "\u0d", L.Location("a buffer", -1)) ]
        @test evaluate("\n")           == [ L.Token(L.ws, "\u0a", L.Location("a buffer", -1)) ]
        @test evaluate("\r")           == [ L.Token(L.ws, "\u0d", L.Location("a buffer", -1)) ]
        @test evaluate(" 	\n\r") == [ L.Token(L.ws, " 	\n\r", L.Location("a buffer", -1)) ]
    end

    @testset "Lexical/Multiple Tokens (Realistic-ish Sequences" begin
        @test evaluate("") == [ L.Token(L.stago, "<", L.Location("a buffer", -1)),
                                   L.Token(L.text, "a", L.Location("a buffer", -1)),
                                   L.Token(L.tagc, ">", L.Location("a buffer", -1)), ]
        @test evaluate("<π>") == [ L.Token(L.stago, "<", L.Location("a buffer", -1)),
                                   L.Token(L.text, "π", L.Location("a buffer", -1)),
                                   L.Token(L.tagc, ">", L.Location("a buffer", -1)), ]
        @test (evaluate("")
               == [ L.Token(L.stago, "<", L.Location("a buffer", -1)),
                    L.Token(L.text, "a", L.Location("a buffer", -1)),
                    L.Token(L.ws, " ", L.Location("a buffer", -1)),
                    L.Token(L.text, "a.a", L.Location("a buffer", -1)),
                    L.Token(L.vi, "=", L.Location("a buffer", -1)),
                    L.Token(L.lit, "\"", L.Location("a buffer", -1)),
                    L.Token(L.text, "Hello", L.Location("a buffer", -1)),
                    L.Token(L.seq, ",", L.Location("a buffer", -1)),
                    L.Token(L.ws, " ", L.Location("a buffer", -1)),
                    L.Token(L.text, "World!", L.Location("a buffer", -1)),
                    L.Token(L.lit, "\"", L.Location("a buffer", -1)),
                    L.Token(L.ws, " ", L.Location("a buffer", -1)),
                    L.Token(L.text, "a.b", L.Location("a buffer", -1)),
                    L.Token(L.vi, "=", L.Location("a buffer", -1)),
                    L.Token(L.lit, "\"", L.Location("a buffer", -1)),
                    L.Token(L.text, "Salut", L.Location("a buffer", -1)),
                    L.Token(L.seq, ",", L.Location("a buffer", -1)),
                    L.Token(L.ws, " ", L.Location("a buffer", -1)),
                    L.Token(L.text, "Monde!", L.Location("a buffer", -1)),
                    L.Token(L.lit, "\"", L.Location("a buffer", -1)),
                    L.Token(L.net, "/", L.Location("a buffer", -1)),
                    L.Token(L.tagc, ">", L.Location("a buffer", -1)), ])
        @test (evaluate("Hello, World!") == [ L.Token(L.stago, "<", L.Location("a buffer", -1)),
                                                     L.Token(L.text, "a", L.Location("a buffer", -1)),
                                                     L.Token(L.tagc, ">", L.Location("a buffer", -1)),
                                                     L.Token(L.text, "Hello", L.Location("a buffer", -1)),
                                                     L.Token(L.seq, ",", L.Location("a buffer", -1)),
                                                     L.Token(L.ws, " ", L.Location("a buffer", -1)),
                                                     L.Token(L.text, "World!", L.Location("a buffer", -1)),
                                                     L.Token(L.etago, "</", L.Location("a buffer", -1)),
                                                     L.Token(L.text, "a", L.Location("a buffer", -1)),
                                                     L.Token(L.tagc, ">", L.Location("a buffer", -1)), ])
        @test (evaluate("<!DOCTYPE root []>") == [ L.Token(L.mdo, "<!", L.Location("a buffer", -1)),
                                                   L.Token(L.text, "DOCTYPE", L.Location("a buffer", -1)),
                                                   L.Token(L.ws, " ", L.Location("a buffer", -1)),
                                                   L.Token(L.text, "root", L.Location("a buffer", -1)),
                                                   L.Token(L.ws, " ", L.Location("a buffer", -1)),
                                                   L.Token(L.dso, "[", L.Location("a buffer", -1)),
                                                   L.Token(L.dsc, "]", L.Location("a buffer", -1)),
                                                   L.Token(L.tagc, ">", L.Location("a buffer", -1)), ])
        @test (evaluate("<!DOCTYPE root [<!ELEMENT root EMPTY>]><root/>")
               == [ L.Token(L.mdo, "<!", L.Location("a buffer", -1)),
                    L.Token(L.text, "DOCTYPE", L.Location("a buffer", -1)),
                    L.Token(L.ws, " ", L.Location("a buffer", -1)),
                    L.Token(L.text, "root", L.Location("a buffer", -1)),
                    L.Token(L.ws, " ", L.Location("a buffer", -1)),
                    L.Token(L.dso, "[", L.Location("a buffer", -1)),
                    L.Token(L.mdo, "<!", L.Location("a buffer", -1)),
                    L.Token(L.text, "ELEMENT", L.Location("a buffer", -1)),
                    L.Token(L.ws, " ", L.Location("a buffer", -1)),
                    L.Token(L.text, "root", L.Location("a buffer", -1)),
                    L.Token(L.ws, " ", L.Location("a buffer", -1)),
                    L.Token(L.text, "EMPTY", L.Location("a buffer", -1)),
                    L.Token(L.tagc, ">", L.Location("a buffer", -1)),
                    L.Token(L.dsc, "]", L.Location("a buffer", -1)),
                    L.Token(L.tagc, ">", L.Location("a buffer", -1)),
                    L.Token(L.stago, "<", L.Location("a buffer", -1)),
                    L.Token(L.text, "root", L.Location("a buffer", -1)),
                    L.Token(L.net, "/", L.Location("a buffer", -1)),
                    L.Token(L.tagc, ">", L.Location("a buffer", -1)), ])
        @test (evaluate("")
               == [ L.Token(L.mdo, "<!", L.Location("a buffer", -1)),
                    L.Token(L.com, "--", L.Location("a buffer", -1)),
                    L.Token(L.ws, " ", L.Location("a buffer", -1)),
                    L.Token(L.text, "This", L.Location("a buffer", -1)),
                    L.Token(L.ws, " ", L.Location("a buffer", -1)),
                    L.Token(L.text, "is", L.Location("a buffer", -1)),
                    L.Token(L.ws, " ", L.Location("a buffer", -1)),
                    L.Token(L.text, "a", L.Location("a buffer", -1)),
                    L.Token(L.ws, " ", L.Location("a buffer", -1)),
                    L.Token(L.text, "comment", L.Location("a buffer", -1)),
                    L.Token(L.seq, ",", L.Location("a buffer", -1)),
                    L.Token(L.ws, " ", L.Location("a buffer", -1)),
                    L.Token(L.text, "don", L.Location("a buffer", -1)),
                    L.Token(L.lita, "'", L.Location("a buffer", -1)),
                    L.Token(L.text, "t", L.Location("a buffer", -1)),
                    L.Token(L.ws, " ", L.Location("a buffer", -1)),
                    L.Token(L.text, "you", L.Location("a buffer", -1)),
                    L.Token(L.ws, " ", L.Location("a buffer", -1)),
                    L.Token(L.text, "know!", L.Location("a buffer", -1)),
                    L.Token(L.ws, " ", L.Location("a buffer", -1)),
                    L.Token(L.com, "--", L.Location("a buffer", -1)),
                    L.Token(L.tagc, ">", L.Location("a buffer", -1)), ])
        @test (evaluate("<?PITarget Value?>") == [ L.Token(L.pio, "<?", L.Location("a buffer", -1)),
                                                   L.Token(L.text, "PITarget", L.Location("a buffer", -1)),
                                                   L.Token(L.ws, " ", L.Location("a buffer", -1)),
                                                   L.Token(L.text, "Value", L.Location("a buffer", -1)),
                                                   L.Token(L.opt, "?", L.Location("a buffer", -1)),
                                                   L.Token(L.tagc, ">", L.Location("a buffer", -1)) ])
        @test (evaluate(" ") == [ L.Token(L.cro, "&#", L.Location("a buffer", -1)),
                                      L.Token(L.text, "32", L.Location("a buffer", -1)),
                                      L.Token(L.refc, ";", L.Location("a buffer", -1)), ])
        @test (evaluate(" ") == [ L.Token(L.cro, "&#", L.Location("a buffer", -1)),
                                       L.Token(L.text, "x20", L.Location("a buffer", -1)),
                                       L.Token(L.refc, ";", L.Location("a buffer", -1)), ])
        @test (evaluate("é") == [ L.Token(L.ero, "&", L.Location("a buffer", -1)),
                                         L.Token(L.text, "eacute", L.Location("a buffer", -1)),
                                         L.Token(L.refc, ";", L.Location("a buffer", -1)), ])
        @test (evaluate("%ISOlat1;") == [ L.Token(L.pero, "%", L.Location("a buffer", -1)),
                                          L.Token(L.text, "ISOlat1", L.Location("a buffer", -1)),
                                          L.Token(L.refc, ";", L.Location("a buffer", -1)), ])
        @test (evaluate("<![CDATA[Hello, World!]]>") == [ L.Token(L.mdo, "<!", L.Location("a buffer", -1)),
                                                          L.Token(L.dso, "[", L.Location("a buffer", -1)),
                                                          L.Token(L.text, "CDATA", L.Location("a buffer", -1)),
                                                          L.Token(L.dso, "[", L.Location("a buffer", -1)),
                                                          L.Token(L.text, "Hello", L.Location("a buffer", -1)),
                                                          L.Token(L.seq, ",", L.Location("a buffer", -1)),
                                                          L.Token(L.ws, " ", L.Location("a buffer", -1)),
                                                          L.Token(L.text, "World!", L.Location("a buffer", -1)),
                                                          L.Token(L.msc, "]]", L.Location("a buffer", -1)),
                                                          L.Token(L.tagc, ">", L.Location("a buffer", -1)), ])
    end
end

max_stars_repo_name: jlegare/NativeXML

max_issues_repo_name: jlegare/NativeXML

max_forks_repo_name: jlegare/NativeXML


text:
using IterativeSolvers
using SparseArrays
using Arpack
using Statistics

""" Convex Factorization Machine with Hazan's algorithm (squared loss)
    Yamada, M. et. al., http://arxiv.org/abs/1507.01073

Model:

f(x;w,W) = w^t z + 0.5 trace(W (xx^t - diag(x.*x)))

Parameters
----------

num_iter: int
   The number of iteration for Hazan's algorithm: (default: 100)

reg_W: double
   The regularization parameter for interaction term (2-way factors) (default 100)

w: double
   d + 1 dimensional vector the global bias (w[0]) and user-item bias (w[1:])

U: double
   d by T dimensional matrix such that W = U U^t

"""
function train(iter, reg, X, Y)
  X = convert(SparseMatrixCSC{Float64,Int64}, X)
  Y = Array(Y)

  n, d = size(X)

  #Add bias for training data
  Z = hcat(ones(n), X)

  T = iter
  η = reg

  U = zeros(d, T)
  P = zeros(d, T)
  λ = ones(T)
  w = zeros(d+1, 1)
  global fval = zeros(T)

  for t in 1:T
    tmp = X * U[:, 1:t]
    fQ = 0.5 * (vec(sum(tmp .* tmp, dims=2)) - (X .* X) * vec(sum(U[:, 1:t] .* U[:, 1:t], dims=2)))

    ZY = Z' * (Y - fQ)

    #Conjugate Gradient: Solve Zw = Y
    wout = cg!(w, Z'*Z, ZY, tol=1e-6, verbose = false, maxiter=100)
    w = vec(wout)

    tr_err = Y - (Z*w + fQ)

    #Frank-Wolfe update: eigs(X diag(tr_err) X^t, 1)
    pout = eigs(X'*spdiagm(0 => sparsevec(tr_err))*X, nev=1, which=:LR, maxiter = 300, tol = 1e-1)[2]

    p = vec(real(pout))

    #Optimal step size
    err = η*((X*p).^2 - (X .* X) * (p .* p)) - fQ
    α = ((tr_err' * err) / (err' * err))

    #Update
    P[:, t] = √η * p
    λ[1:t-1] = (1 - α) * λ[1:t-1]
    λ[t] = max(1e-10, α)

    U[:, 1:t] = P[:, 1:t] .* sqrt.(λ[1:t])'

    #Traning RMSE
    global fval[t] = sqrt(mean(tr_err.^2))

    #fval: training RMSE
    println("iteration:", t, " Training RMSE:", fval[t])

    tmp = nothing
    fQ = nothing
    ZY = nothing
    wout = nothing
    tr_err = nothing
    pout = nothing
    p = nothing
    err = nothing
    α= nothing
    end

    return w, U
end

function predicter(w, U, X)
    X = convert(SparseMatrixCSC{Float64,Int64}, X)

    #Compute fQ (2-way factor)
    tmp = X * U
    fQ = 0.5 * (vec(sum(tmp .* tmp, dims=2)) - (X .* X) * vec(sum(U .* U, dims=2)))

    Ŷ = w[1] .+ X * w[2:end] + fQ

  return Ŷ
end


text:
module TestBracketHighlighter

using Test
using OhMyREPL
using Tokenize

b = IOBuffer()
str = "(function :foobar, foobar )# foobar"
idx = 3 #  ^
OhMyREPL.test_pass(b, OhMyREPL.Passes.BracketHighlighter.BRACKETMATCHER_SETTINGS,
    str, idx)

println("Original string: ", str)
println("BracketMatched string: ", String(take!(b)))
println()

end


text:
# ---
# title: 1324. Print Words Vertically
# id: problem1324
# author: Tian Jun
# date: 2020-10-31
# difficulty: Medium
# categories: String
# link: <https://leetcode.com/problems/print-words-vertically/description/>
# hidden: true
# ---
#
# Given a string `s`. Return all the words vertically in the same order in which
# they appear in `s`.
# Words are returned as a list of strings, complete with spaces when is
# necessary. (Trailing spaces are not allowed).
# Each word would be put on only one column and that in one column there will be
# only one word.
#
#
#
# **Example 1:**
#
#
#
#     Input: s = "HOW ARE YOU"
#     Output: ["HAY","ORO","WEU"]
#     Explanation: Each word is printed vertically.
#      "HAY"
#      "ORO"
#      "WEU"
#
#
# **Example 2:**
#
#
#
#     Input: s = "TO BE OR NOT TO BE"
#     Output: ["TBONTB","OEROOE","   T"]
#     Explanation: Trailing spaces is not allowed.
#     "TBONTB"
#     "OEROOE"
#     "   T"
#
#
# **Example 3:**
#
#
#
#     Input: s = "CONTEST IS COMING"
#     Output: ["CIC","OSO","N M","T I","E N","S G","T"]
#
#
#
#
# **Constraints:**
#
#   * `1 <= s.length <= 200`
#   * `s` contains only upper case English letters.
#   * It's guaranteed that there is only one space between 2 words.
#
#
## @lc code=start
using LeetCode

## add your code here:
## @lc code=end