text:
#include <assert.h>
#include <stdlib.h>
#include <ctype.h>
#include <string.h>

#include <asf.h>
#include "asf_tiff.h"

#include <gsl/gsl_math.h>
#include <proj_api.h>

#include "asf_jpeg.h"
#include <png.h>
#include "envi.h"

#include "dateUtil.h"
#include <time.h>
#include "matrix.h"
#include <asf_nan.h>
#include <asf_endian.h>
#include <asf_meta.h>
#include <asf_export.h>
#include <asf_raster.h>
#include <float_image.h>
#include <spheroids.h>
#include <typlim.h>
#include <netcdf.h>

#define PGM_MAGIC_NUMBER    "P5"
#ifdef  MAX_RGB
#undef  MAX_RGB
#endif
#define MAX_RGB             255
#define USHORT_MAX          65535
#ifdef  OPT_STRIP_BYTES
#undef  OPT_STRIP_BYTES
#endif
#define OPT_STRIP_BYTES     8192

// If you change the BAND_ID_STRING here, make sure you make an identical
// change in the import library ...the defs must match
#define BAND_ID_STRING "Color Channel (Band) Contents in RGBA+ order"

/* This constant is from the GeoTIFF spec.  It basically means that
   the system which would normally be specified by the field
   (projected coordinate system, datum, ellipsoid, whatever), in
   instead going to be specified by more detailed low level tags.  */
static const int user_defined_value_code = 32767;

static char *t3_matrix[9] = {"T11.bin","T12_real.bin","T12_imag.bin",
			     "T13_real.bin","T13_imag.bin","T22.bin",
			     "T23_real.bin","T23_imag.bin","T33.bin"};
static char *t4_matrix[16] = {"T11.bin","T12_real.bin","T12_imag.bin",
			      "T13_real.bin","T13_imag.bin","T14_real.bin",
			      "T14_imag.bin","T22.bin","T23_real.bin",
			      "T23_imag.bin","T24_real.bin","T24_imag.bin",
			      "T33.bin","T34_real.bin","T34_imag.bin",
			      "T44.bin"};
static char *c2_matrix[4] = {"C11.bin","C12_real.bin","C12_imag.bin",
			     "C22.bin"};
static char *c3_matrix[9] = {"C11.bin","C12_real.bin","C12_imag.bin",
			     "C13_real.bin","C13_imag.bin","C22.bin",
			     "C23_real.bin","C23_imag.bin","C33.bin"};
static char *c4_matrix[16] = {"C11.bin","C12_real.bin","C12_imag.bin",
			      "C13_real.bin","C13_imag.bin","C14_real.bin",
			      "C14_imag.bin","C22.bin","C23_real.bin",
			      "C23_imag.bin","C24_real.bin","C24_imag.bin",
			      "C33.bin","C34_real.bin","C34_imag.bin",
			      "C44.bin"};
static char *freeman2_decomposition[2] =
  {"Freeman2_Ground.bin","Freeman2_Vol.bin"};
static char *freeman3_decomposition[3] =
  {"Freeman_Dbl.bin","Freeman_Odd.bin","Freeman_Vol.bin"};
static char *vanZyl3_decomposition[3] =
  {"VanZyl3_Dbl.bin","VanZyl3_Odd.bin","VanZyl3_Vol.bin"};
static char *yamaguchi3_decomposition[3] =
  {"Yamaguchi3_Dbl.bin","Yamaguchi3_Odd.bin","Yamaguchi3_Vol.bin"};
static char *yamaguchi4_decomposition[4] =
  {"Yamaguchi4_Dbl.bin","Yamaguchi4_Hlx.bin","Yamaguchi4_Odd.bin",
   "Yamaguchi4_Vol.bin"};
static char *krogager_decomposition[3] =
  {"Krogager_Kd.bin","Krogager_Kh.bin","Krogager_Ks.bin"};
static char *touzi1_decomposition[3] =
  {"TSVM_alpha_s1.bin","TSVM_alpha_s2.bin","TSVM_alpha_s3.bin"};
static char *touzi2_decomposition[3] =
  {"TSVM_phi_s1.bin","TSVM_phi_s2.bin","TSVM_phi_s3.bin"};
static char *touzi3_decomposition[3] =
  {"TSVM_tau_m1.bin","TSVM_tau_m2.bin","TSVM_tau_m3.bin"};
static char *touzi4_decomposition[3] =
  {"TSVM_psi1.bin","TSVM_psi2.bin","TSVM_psi3.bin"};
static char *touzi5_decomposition[4] =
  {"TSVM_alpha_s.bin","TSVM_phi_s.bin","TSVM_tau_m.bin","TSVM_psi.bin"};

int is_slant_range(meta_parameters *md);
void initialize_tiff_file (TIFF **otif, GTIF **ogtif,
                           const char *output_file_name,
                           const char *metadata_file_name,
                           int is_geotiff, scale_t sample_mapping,
                           int rgb, int *palette_color_tiff, char **band_names,
                           char *look_up_table_name, int is_colormapped);
GTIF* write_tags_for_geotiff (TIFF *otif, const char *metadata_file_name,
                              int rgb, char **band_names, int palette_color_tiff);
void finalize_tiff_file(TIFF *otif, GTIF *ogtif, int is_geotiff);
void append_band_names(char **band_names, int rgb, char *citation, int have_look_up_table);
int lut_to_tiff_palette(unsigned short **colors, int size, char *look_up_table_name);
void dump_palette_tiff_color_map(unsigned short *colors, int map_size);
int meta_colormap_to_tiff_palette(unsigned short **colors, int *byte_image, meta_colormap *colormap);
char *sample_mapping2string(scale_t sample_mapping);
void colormap_to_lut_file(meta_colormap *cm, const char *lut_file);

static char *format2str(output_format_t format)
{
  char *str = (char *) MALLOC(sizeof(char)*256);

  if (format == ENVI)
    strcpy(str, "ENVI");
  else if (format == ESRI)
    strcpy(str, "ESRI");
  else if (format == GEOTIFF)
    strcpy(str, "GEOTIFF");
  else if (format == TIF)
    strcpy(str, "TIFF");
  else if (format == JPEG)
    strcpy(str, "JPEG");
  else if (format == PGM)
    strcpy(str, "PGM");
  else if (format == PNG)
    strcpy(str, "PNG");
  else if (format == PNG_ALPHA)
    strcpy(str, "PNG ALPHA");
  else if (format == PNG_GE)
    strcpy(str, "PNG GOOGLE EARTH");
  else if (format == KML)
    strcpy(str, "KML");
  else if (format == POLSARPRO_HDR)
    strcpy(str, "POLSARPRO with ENVI header");
  else if (format == HDF)
    strcpy(str, "HDF5");
  else if (format == NC)
    strcpy(str, "netCDF");
  else
    strcpy(str, MAGIC_UNSET_STRING);

  return str;
}

void initialize_tiff_file (TIFF **otif, GTIF **ogtif,
                           const char *output_file_name,
                           const char *metadata_file_name,
                           int is_geotiff, scale_t sample_mapping,
                           int rgb, int *palette_color_tiff, char **band_names,
                           char *look_up_table_name, int is_colormapped)
{
  unsigned short sample_size;
  int max_dn, map_size = 0, palette_color = 0;
  unsigned short rows_per_strip;
  unsigned short *colors = NULL;
  int have_look_up_table = look_up_table_name && strlen(look_up_table_name) > 0;

  _XTIFFInitialize();

  // Open output tiff file
  *otif = XTIFFOpen (output_file_name, "w");
  asfRequire(otif != NULL, "Error opening output TIFF file.\n");

  /* Get the image metadata.  */
  meta_parameters *md = meta_read (metadata_file_name);

  int byte_image = (md->general->data_type == BYTE) ||
    !(sample_mapping == NONE && !md->optical && !have_look_up_table);
  int int_image = (md->general->data_type == INTEGER16 &&
    !md->optical && !have_look_up_table);

  if (!byte_image && !int_image) {
      // Float image
      asfRequire(sizeof (float) == 4,
                 "Size of the unsigned char data type on this machine is "
                 "different than expected.\n");
      sample_size = 4;
      TIFFSetField(*otif, TIFFTAG_SAMPLEFORMAT, SAMPLEFORMAT_IEEEFP);
  }
  else if (int_image) {
    sample_size = 2;
    TIFFSetField(*otif, TIFFTAG_SAMPLEFORMAT, SAMPLEFORMAT_UINT);
  }
  else {
      // Byte image
      asfRequire(sizeof(unsigned char) == 1,
                 "Size of the unsigned char data type on this machine is "
                 "different than expected.\n");
      if (have_look_up_table) {
          // Get max DN from lut file and if it's greater than 255, then
          // the TIFF standard will not allow indexed color.
          if (sizeof(unsigned short) != 2) {
              // The TIFF standard requires an unsigned short to be 16 bits long
              asfPrintError("Size of the unsigned short integer data type on this machine (%d bytes) is "
                      "different than expected (2 bytes).\n", sizeof(unsigned short));
          }
          // Try #1 ...Try 2 bytes just to get past lut_to_tiff_palette() with no errors
          // ...More accurately, we are using lut_to_tiff_palette() to determine max_dn, the
          // minimum number of entries that the color table must have
          sample_size = 2; // Unsigned short ...2 bytes allows a color map 65535 elements long or smaller
          map_size = 1 << (sample_size * 8); // 2^bits_per_sample;
          max_dn = lut_to_tiff_palette(&colors, map_size, look_up_table_name);
          sample_size = 1;
          palette_color = 0;
          if (max_dn <= MAX_RGB) {
              sample_size = 1;
              map_size = 1 << (sample_size * 8); // 2^bits_per_sample;
              max_dn = lut_to_tiff_palette(&colors, map_size, look_up_table_name);
              palette_color = 1;
          }
      }
      else {
          // No look-up table, so the data is already 0-255 or will be resampled down to
          // the 0-255 range.  Only need a 1-byte pixel...
          sample_size = 1;
      }
      // The sample format is 'unsigned integer', but the number of bytes per
      // sample, i.e. short, int, or long, is set by TIFFTAG_BITSPERSAMPLE below
      // which in turn is determined by the sample_size (in bytes) set above ;-)
      // Note that for color images, "bits per sample" refers to one color component,
      // not the group of 3 components.
      TIFFSetField(*otif, TIFFTAG_SAMPLEFORMAT, SAMPLEFORMAT_UINT);
  }
  // use the metadata's colormap if we have one.  a -lut specified on the command
  // line will override, though (and in that case we should have already set
  // up the colormap via lut_to_tiff_palette())
  if (is_colormapped && md->colormap && !have_look_up_table)
  {
      asfPrintStatus("\nFound single-band image with RGB color map ...storing as a Palette\n"
          "Color TIFF\n\n");
      palette_color = 1;
      max_dn = map_size = meta_colormap_to_tiff_palette(&colors, &byte_image, md->colormap);
  }

  /* Set the normal TIFF image tags.  */
  TIFFSetField(*otif, TIFFTAG_SUBFILETYPE, 0);
  TIFFSetField(*otif, TIFFTAG_IMAGEWIDTH, md->general->sample_count);
  TIFFSetField(*otif, TIFFTAG_IMAGELENGTH, md->general->line_count);
  TIFFSetField(*otif, TIFFTAG_BITSPERSAMPLE, sample_size * 8);
  TIFFSetField(*otif, TIFFTAG_COMPRESSION, COMPRESSION_LZW);
  if  (
       (!have_look_up_table && rgb           )  ||
       ( have_look_up_table && !palette_color)
      )
  {
      // Color RGB (no palette) image
      TIFFSetField(*otif, TIFFTAG_PHOTOMETRIC, PHOTOMETRIC_RGB);
      TIFFSetField(*otif, TIFFTAG_SAMPLESPERPIXEL, 3);
  }
  else if (byte_image && palette_color) {
      // Color Palette image
      TIFFSetField(*otif, TIFFTAG_PHOTOMETRIC, PHOTOMETRIC_PALETTE);
      TIFFSetField(*otif, TIFFTAG_SAMPLESPERPIXEL, 1);

      unsigned short *red, *green, *blue;
      asfRequire(colors != NULL, "Color map not allocated.\n");
      asfRequire(map_size > 0,   "Color map not initialized.\n");
      red   = colors;
      green = colors +   map_size;
      blue  = colors + 2*map_size;
      TIFFSetField(*otif, TIFFTAG_COLORMAP, red, green, blue);
  }
  else {
    // Else assume grayscale with minimum value (usually zero) means 'black'
    TIFFSetField(*otif, TIFFTAG_PHOTOMETRIC, PHOTOMETRIC_MINISBLACK);
    TIFFSetField(*otif, TIFFTAG_SAMPLESPERPIXEL, 1);
  }

  // Set rows per strip to 1, 4, 8, or 16 ...trying to set a near optimal 8k strip size
  // FIXME: Implement the creation of TIFFS with optimized number of rows per strip ...someday
  rows_per_strip = 1;//((OPT_STRIP_BYTES / (sample_size * md->general->sample_count)) < 4)  ? 1  :
                   //((OPT_STRIP_BYTES / (sample_size * md->general->sample_count)) < 8)  ? 4  :
                   //((OPT_STRIP_BYTES / (sample_size * md->general->sample_count)) < 16) ? 8  :
                   //((OPT_STRIP_BYTES / (sample_size * md->general->sample_count)) < 32) ? 16 :
                     //                                             (unsigned short) USHORT_MAX;
  TIFFSetField(*otif, TIFFTAG_ROWSPERSTRIP, rows_per_strip);

  TIFFSetField(*otif, TIFFTAG_XRESOLUTION, 1.0);
  TIFFSetField(*otif, TIFFTAG_YRESOLUTION, 1.0);
  TIFFSetField(*otif, TIFFTAG_RESOLUTIONUNIT, RESUNIT_NONE);
  TIFFSetField(*otif, TIFFTAG_PLANARCONFIG, PLANARCONFIG_CONTIG);

  if (is_geotiff) {
      *ogtif = write_tags_for_geotiff (*otif, metadata_file_name, rgb, band_names, palette_color);
  }

  if (should_write_insar_xml_meta(md)) {
    char *xml_meta = get_insar_xml_string(md, TRUE);
      TIFFSetField(*otif, TIFFTAG_ASF_INSAR_METADATA, xml_meta);
      FREE(xml_meta);
  }
  else if (should_write_dem_xml_meta(md)) {
    char *xml_meta = get_dem_xml_string(md, TRUE);
    TIFFSetField(*otif, TIFFTAG_ASF_DEM_METADATA, xml_meta);
    FREE(xml_meta);
  }

  *palette_color_tiff = palette_color;

  meta_free(md);
}

void initialize_png_file(const char *output_file_name,
			 meta_parameters *meta, FILE **opng,
			 png_structp *png_ptr, png_infop *info_ptr,
			 int rgb)
{
  return initialize_png_file_ext(output_file_name, meta, opng, png_ptr,
				 info_ptr, rgb, FALSE);
}
void initialize_png_file_ext(const char *output_file_name,
			     meta_parameters *meta, FILE **opng,
			     png_structp *png_ptr, png_infop *info_ptr,
			     int rgb, int alpha)
{
    *opng = FOPEN(output_file_name, "wb");
    *png_ptr = png_create_write_struct(PNG_LIBPNG_VER_STRING,
        NULL, NULL, NULL);
    if (!(*png_ptr))
        asfPrintError("Error creating PNG write structure!\n");

    *info_ptr = png_create_info_struct(*png_ptr);
    if (!(*info_ptr))
        asfPrintError("Error creating PNG info structure!\n");

    png_init_io(*png_ptr, *opng);

    int width = meta->general->sample_count;
    int height = meta->general->line_count;
    png_byte color_type;
    if (alpha == 0)
      color_type = rgb ? PNG_COLOR_TYPE_RGB : PNG_COLOR_TYPE_GRAY;
    else if (alpha == 1) {
      color_type = rgb ? PNG_COLOR_TYPE_RGB : PNG_COLOR_TYPE_GRAY;
      int ii;
      if (rgb) {
	png_color_16 trans_rgb_value[256];
	for (ii=0; ii<256; ii++) {
	  trans_rgb_value[ii].red = 255;
	  trans_rgb_value[ii].green = 255;
	  trans_rgb_value[ii].blue = 255;
	}
	// setting black to transparent
	trans_rgb_value[0].red = 0;
	trans_rgb_value[0].green = 0;
	trans_rgb_value[0].blue = 0;
	png_set_tRNS(*png_ptr, *info_ptr, trans_rgb_value, 256, NULL);
      }
      else {
	png_byte trans_values[256];
	for (ii=0; ii<256; ii++)
	  trans_values[ii] = 255;
	trans_values[0] = 0; // setting black to transparent
	png_set_tRNS(*png_ptr, *info_ptr, trans_values, 256, NULL);
      }
    }
    else if (alpha == 2)
      color_type = PNG_COLOR_TYPE_RGB_ALPHA;

    png_set_IHDR(*png_ptr, *info_ptr, width, height, 8, color_type,
            PNG_INTERLACE_NONE, PNG_COMPRESSION_TYPE_DEFAULT,
            PNG_FILTER_TYPE_DEFAULT);

    png_write_info(*png_ptr, *info_ptr);
}

void initialize_jpeg_file(const char *output_file_name,
        meta_parameters *meta, FILE **ojpeg,
        struct jpeg_compress_struct *cinfo, int rgb)
{
  struct jpeg_error_mgr *jerr = MALLOC(sizeof(struct jpeg_error_mgr));

  /* We need a version of the data in JSAMPLE form, so we have to map
     floats into JSAMPLEs.  We do this by defining a region 2 sigma on
     either side of the mean to be mapped in the range of JSAMPLE
     linearly, and clamping everything outside this range at the
     limits o the JSAMPLE range.  */
  /* Here are some very funky checks to try to ensure that the JSAMPLE
     really is the type we expect, so we can scale properly.  */
  asfRequire(sizeof(unsigned char) == 1,
             "Size of the unsigned char data type on this machine is "
             "different than expected.\n");
  asfRequire(sizeof(unsigned char) == sizeof (JSAMPLE),
             "Size of unsigned char data type on this machine is different "
             "than JPEG byte size.\n");
  JSAMPLE test_jsample = 0;
  test_jsample--;
  asfRequire(test_jsample == UCHAR_MAX,
             "Something wacky happened, like data overflow.\n");

  // Initializae libjpg structures.
  cinfo->err = jpeg_std_error (jerr);
  jpeg_create_compress (cinfo);

  // Open the output file to be used.
  *ojpeg = FOPEN(output_file_name, "wb");

  // Connect jpeg output to the output file to be used.
  jpeg_stdio_dest (cinfo, *ojpeg);

  // Set image parameters that libjpeg needs to know about.
  cinfo->image_width = meta->general->sample_count;
  cinfo->image_height = meta->general->line_count;
  if (rgb) {
    cinfo->in_color_space = JCS_RGB;
    cinfo->input_components = 3;
  }
  else {
    cinfo->in_color_space = JCS_GRAYSCALE;
    cinfo->input_components = 1;
  }
  jpeg_set_defaults (cinfo);   // Use default compression parameters.
  jpeg_set_quality(cinfo, 100, 1);

  // Reassure libjpeg that we will be writing a complete JPEG file.
  jpeg_start_compress (cinfo, TRUE);

  return;
}

void initialize_pgm_file(const char *output_file_name,
       meta_parameters *meta, FILE **opgm)
{
  const int max_color_value = 255;

  *opgm = FOPEN (output_file_name, "w");

  fprintf (*opgm, "%s\n", PGM_MAGIC_NUMBER);
  fprintf (*opgm, "%ld\n", (long int) meta->general->sample_count);
  fprintf (*opgm, "%ld\n", (long int) meta->general->line_count);
  fprintf (*opgm, "%d\n", max_color_value);

  return;
}

void initialize_polsarpro_file(const char *output_file_name,
			       meta_parameters *meta, FILE **ofp)
{
  *ofp = FOPEN(output_file_name, "wb");

  char *output_header_file_name =
    (char *) MALLOC(sizeof(char) * strlen(output_file_name) + 5);
  sprintf(output_header_file_name, "%s.hdr", output_file_name);
  char *band_name = get_filename(output_file_name);
  envi_header *envi = meta2envi(meta);
  envi->bands = 1;
  char *band = stripExt(band_name);
  strcpy(envi->band_name, band_name);
  envi->byte_order = 0; // PolSARPro data is little endian by default
  write_envi_header(output_header_file_name, output_file_name, meta, envi);
  FREE(output_header_file_name);
  FREE(band_name);
  FREE(band);
  FREE(envi);

  return;
}

GTIF* write_tags_for_geotiff (TIFF *otif, const char *metadata_file_name,
                             int rgb, char **band_names, int palette_color_tiff)
{
  /* Get the image metadata.  */
  meta_parameters *md = meta_read (metadata_file_name);
  int map_projected = is_map_projected(md);
  int is_slant_range_image = is_slant_range(md);
  GTIF *ogtif;

  /* Semi-major and -minor ellipse axis lengths.  This shows up in two
  different places in our metadata, we want the projected one if
  its available, otherwise the one from general.  */
  double re_major, re_minor;

  asfRequire (sizeof (unsigned short) == 2,
              "Unsigned short integer data type size is different than "
                  "expected.\n");
  asfRequire (sizeof (unsigned int) == 4,
              "Unsigned integer data type size is different than expected.\n");

  if (!map_projected) {
    asfPrintWarning("Image is not map-projected or the projection type is\n"
        "unrecognized or unsupported.\n\n"
        "Exporting a non-geocoded, standard TIFF file instead...\n");
  }

  if (is_slant_range_image) {
    asfPrintWarning("Image is either a SAR slant-range image or a ScanSAR\n"
        "along-track/cross-track projection.  Exporting as a GeoTIFF is not\n"
        "supported for these types.\n\n"
        "Exporting a standard non-georeferenced/non-geocoded TIFF file instead...\n");
  }

  /******************************************/
  /* Set the GeoTIFF extension image tags.  */
  ogtif = GTIFNew (otif);
  asfRequire (ogtif != NULL, "Error opening output GeoKey file descriptor.\n");

  // Common tags
  if (map_projected)
  {
    // Write common tags for map-projected GeoTIFFs
    GTIFKeySet (ogtif, GTRasterTypeGeoKey, TYPE_SHORT, 1, RasterPixelIsArea);
    if (md->projection->type != LAT_LONG_PSEUDO_PROJECTION)
      GTIFKeySet (ogtif, GTModelTypeGeoKey, TYPE_SHORT, 1, ModelTypeProjected);
    else
      GTIFKeySet (ogtif, GTModelTypeGeoKey, TYPE_SHORT, 1, ModelTypeGeographic);
    GTIFKeySet (ogtif, GeogLinearUnitsGeoKey, TYPE_SHORT, 1, Linear_Meter);
    GTIFKeySet (ogtif, GeogAngularUnitsGeoKey, TYPE_SHORT, 1, Angular_Degree);
    GTIFKeySet (ogtif, ProjLinearUnitsGeoKey, TYPE_SHORT, 1, Linear_Meter);
    GTIFKeySet (ogtif, GeogPrimeMeridianGeoKey, TYPE_SHORT, 1, PM_Greenwich);
    re_major = md->projection->re_major;
    re_minor = md->projection->re_minor;
  }
  else {
    // If not map-projected, then common tags are not written.  If the file
    // is georeferenced however, then pixel scale and tie point will be
    // written below

    re_major = md->general->re_major;
    re_minor = md->general->re_minor;
  }

  // Pixel scale and tie points
  if (md->projection) {
    if (!(meta_is_valid_double(md->projection->startX) &&
          meta_is_valid_double(md->projection->startY))
       )
    {
      asfPrintWarning("Metadata projection block contains invalid startX "
          "or startY values\n");
    }
    // Write georeferencing data
    if (!is_slant_range_image) {
      double tie_point[6];
      double pixel_scale[3];
      // FIXME: Note that the following tie points are in meters, but that's
      // because we assume linear meters and a map-projected image.  If we ever
      // export a geographic (lat/long) geotiff, then this code will need to
      // smarten-up and write the tie points in lat/long or meters depending on the
      // type of image data.  Same thing applies to perX and perY etc etc.
      tie_point[0] = 0.0;
      tie_point[1] = 0.0;
      tie_point[2] = 0.0;

      // these are both meters
      tie_point[3] = md->projection->startX +
                     md->general->start_sample * md->projection->perX;
      tie_point[4] = md->projection->startY +
                     md->general->start_line * md->projection->perY;

      tie_point[5] = 0.0;
      TIFFSetField(otif, TIFFTAG_GEOTIEPOINTS, 6, tie_point);

      /* Set the scale of the pixels, in projection coordinates.  */
      if (md->projection->perX < 0.0) {
        asfPrintWarning("Unexpected non-positive perX in the "
            "projection block.\n");
      }
      else {
        pixel_scale[0] = fabs(md->projection->perX);
      }

      if (md->projection->perY > 0.0) {
        asfPrintWarning("Unexpected non-negative perY in the "
            "projection block.\n");
      }
      else {
        pixel_scale[1] = fabs(md->projection->perY);
        pixel_scale[2] = 0;
      }
      TIFFSetField (otif, TIFFTAG_GEOPIXELSCALE, 3, pixel_scale);
    }
  }

  // Write geocode (map projection) parameters
  if (map_projected) {
    int max_citation_length = 2048;
    char *citation;
    int citation_length;

    // For now, only support the Hughes ellipsoid for polar stereo
    if (md->projection->datum == HUGHES_DATUM &&
        md->projection->type != POLAR_STEREOGRAPHIC)
    {
      asfPrintError("Hughes Ellipsoid is only supported for Polar Stereographic projections.\n");
    }

    /* Write the appropriate geotiff keys for the projection type.  */
    switch (md->projection->type) {
      case UNIVERSAL_TRANSVERSE_MERCATOR:
      {
        short pcs;
        if ( UTM_2_PCS(&pcs, md->projection->datum,
             md->projection->param.utm.zone, md->projection->hem) ) {
          GTIFKeySet (ogtif, ProjectedCSTypeGeoKey, TYPE_SHORT, 1, pcs);
        GTIFKeySet (ogtif, ProjectionGeoKey, TYPE_SHORT, 1,
                    user_defined_value_code);
        GTIFKeySet (ogtif, ProjCoordTransGeoKey, TYPE_SHORT, 1,
                    CT_TransverseMercator);

	  if (meta_is_valid_double(md->projection->param.utm.false_easting)) {
	    GTIFKeySet (ogtif, ProjFalseEastingGeoKey, TYPE_DOUBLE, 1,
			md->projection->param.utm.false_easting);
	  }
	  else {
	    GTIFKeySet (ogtif, ProjFalseEastingGeoKey, TYPE_DOUBLE, 1, 0.0);
	  }
	  if (meta_is_valid_double(md->projection->param.utm.false_northing)) {
	    GTIFKeySet (ogtif, ProjFalseNorthingGeoKey, TYPE_DOUBLE, 1,
			md->projection->param.utm.false_northing);
	  }
	  else {
	    GTIFKeySet (ogtif, ProjFalseNorthingGeoKey, TYPE_DOUBLE, 1, 0.0);
	  }
	  if (meta_is_valid_double(md->projection->param.utm.lat0)) {
	    GTIFKeySet (ogtif, ProjNatOriginLatGeoKey, TYPE_DOUBLE, 1,
			md->projection->param.utm.lat0);
	  }
	  if (meta_is_valid_double(md->projection->param.utm.lon0)) {
	    GTIFKeySet (ogtif, ProjNatOriginLongGeoKey, TYPE_DOUBLE, 1,
			md->projection->param.utm.lon0);
	  }
	  GTIFKeySet (ogtif, ProjScaleAtNatOriginGeoKey, TYPE_DOUBLE, 1,
		      md->projection->param.utm.scale_factor);

	  write_datum_key(ogtif, md->projection->datum);
	  write_spheroid_key(ogtif, md->projection->spheroid, re_major,
			     re_minor);

          // Write the citation
          char datum_str[256];
          if (md->projection->datum == ITRF97_DATUM) {
            strcpy(datum_str, "ITRF97 (WGS 84)");
          }
          else {
            pcs_2_string (datum_str, pcs);
          }
          citation = MALLOC ((max_citation_length + 1) * sizeof (char));
          snprintf (citation, max_citation_length + 1,
                    "UTM zone %d %c projected GeoTIFF on %s "
                    "%s written by Alaska Satellite Facility tools.",
                    md->projection->param.utm.zone, md->projection->hem,
                    datum_str,
                    md->projection->datum == HUGHES_DATUM ? "ellipsoid" : "datum");
          append_band_names(band_names, rgb, citation, palette_color_tiff);
          citation_length = strlen(citation);
          asfRequire((citation_length >= 0) && (citation_length <= max_citation_length),
                     "GeoTIFF citation too long" );
          GTIFKeySet (ogtif, PCSCitationGeoKey, TYPE_ASCII, 1, citation);
          GTIFKeySet (ogtif, GTCitationGeoKey, TYPE_ASCII, 1, citation);
          FREE(citation);
        }
        else {
          asfPrintWarning("Unsupported combination of datum and hemisphere for a UTM\n"
              "map projection occurred.\n"
              "...GeoTIFF will be written but will not contain projection information\n"
              "other than tiepoints and pixel scales.\n");
        }
      }
        break;
      case ALBERS_EQUAL_AREA:
      {
        GTIFKeySet (ogtif, ProjectedCSTypeGeoKey, TYPE_SHORT, 1,
                    user_defined_value_code);
        GTIFKeySet (ogtif, ProjectionGeoKey, TYPE_SHORT, 1,
                    user_defined_value_code);
        GTIFKeySet (ogtif, ProjCoordTransGeoKey, TYPE_SHORT, 1,
                    CT_AlbersEqualArea);
        if (meta_is_valid_double(md->projection->param.albers.std_parallel1)) {
          GTIFKeySet (ogtif, ProjStdParallel1GeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.albers.std_parallel1);
        }
        if (meta_is_valid_double(md->projection->param.albers.std_parallel2)) {
          GTIFKeySet (ogtif, ProjStdParallel2GeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.albers.std_parallel2);
        }
        if (meta_is_valid_double(md->projection->param.albers.false_easting)) {
          GTIFKeySet (ogtif, ProjFalseEastingGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.albers.false_easting);
        }
        else {
          GTIFKeySet (ogtif, ProjFalseEastingGeoKey, TYPE_DOUBLE, 1, 0.0);
        }
        if (meta_is_valid_double(md->projection->param.albers.false_northing)) {
          GTIFKeySet (ogtif, ProjFalseNorthingGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.albers.false_northing);
        }
        else {
          GTIFKeySet (ogtif, ProjFalseNorthingGeoKey, TYPE_DOUBLE, 1, 0.0);
        }
        if (meta_is_valid_double(md->projection->param.albers.orig_latitude)) {
          GTIFKeySet (ogtif, ProjNatOriginLatGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.albers.orig_latitude);
        }
        if (meta_is_valid_double(md->projection->param.albers.center_meridian)) {
          // The following is where ArcGIS looks for the center meridian
          GTIFKeySet (ogtif, ProjCenterLongGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.albers.center_meridian);
          // The following is where the center meridian _should_ be stored
          GTIFKeySet (ogtif, ProjNatOriginLongGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.albers.center_meridian);
        }
        write_datum_key(ogtif, md->projection->datum);
        write_spheroid_key(ogtif, md->projection->spheroid, re_major, re_minor);

        /* Set the citation key.  */
        char datum_str[256];
        datum_2_string (datum_str, md->projection->datum);
        citation = MALLOC ((max_citation_length + 1) * sizeof (char));
        snprintf (citation, max_citation_length + 1,
                  "Albers equal-area conic projected GeoTIFF using %s "
                  "%s written by Alaska Satellite Facility "
                  "tools.", datum_str,
                      md->projection->datum == HUGHES_DATUM ? "ellipsoid" : "datum");
        append_band_names(band_names, rgb, citation, palette_color_tiff);
        citation_length = strlen(citation);
        asfRequire (citation_length >= 0 && citation_length <= max_citation_length,
                    "bad citation length");
        // The following is not needed for any but UTM (according to the standard)
        // but it appears that everybody uses it anyway... so we'll write it
        GTIFKeySet (ogtif, PCSCitationGeoKey, TYPE_ASCII, 1, citation);
        // The following is recommended by the standard
        GTIFKeySet (ogtif, GTCitationGeoKey, TYPE_ASCII, 1, citation);
        free (citation);
      }
        break;
      case LAMBERT_CONFORMAL_CONIC:
      {
        GTIFKeySet (ogtif, ProjectedCSTypeGeoKey, TYPE_SHORT, 1,
                    user_defined_value_code);
        GTIFKeySet (ogtif, ProjectionGeoKey, TYPE_SHORT, 1,
                    user_defined_value_code);
        GTIFKeySet (ogtif, ProjCoordTransGeoKey, TYPE_SHORT, 1,
                    CT_LambertConfConic_2SP);
        if (meta_is_valid_double(md->projection->param.lamcc.plat1)) {
          GTIFKeySet (ogtif, ProjStdParallel1GeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.lamcc.plat1);
        }
        if (meta_is_valid_double(md->projection->param.lamcc.plat2)) {
          GTIFKeySet (ogtif, ProjStdParallel2GeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.lamcc.plat2);
        }
        if (meta_is_valid_double(md->projection->param.lamcc.false_easting)) {
          GTIFKeySet (ogtif, ProjFalseOriginEastingGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.lamcc.false_easting);
        }
        else {
          GTIFKeySet (ogtif, ProjFalseOriginEastingGeoKey, TYPE_DOUBLE, 1, 0.0);
        }
        if (meta_is_valid_double(md->projection->param.lamcc.false_northing)) {
          GTIFKeySet (ogtif, ProjFalseOriginNorthingGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.lamcc.false_northing);
        }
        else {
          GTIFKeySet(ogtif, ProjFalseOriginNorthingGeoKey, TYPE_DOUBLE, 1, 0.0);
        }
        if (meta_is_valid_double(md->projection->param.lamcc.lon0)) {
          GTIFKeySet (ogtif, ProjFalseOriginLongGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.lamcc.lon0);
        }
        if (meta_is_valid_double(md->projection->param.lamcc.lat0)) {
          GTIFKeySet (ogtif, ProjFalseOriginLatGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.lamcc.lat0);
        }
        write_datum_key(ogtif, md->projection->datum);
        write_spheroid_key(ogtif, md->projection->spheroid, re_major, re_minor);

        /* Set the citation key.  */
        char datum_str[256];
        datum_2_string (datum_str, md->projection->datum);
        citation = MALLOC ((max_citation_length + 1) * sizeof (char));
        snprintf (citation, max_citation_length + 1,
                  "Lambert conformal conic projected GeoTIFF using %s "
                  "%s written by Alaska Satellite Facility "
                  "tools.", datum_str,
                  md->projection->datum == HUGHES_DATUM ? "ellipsoid" : "datum");
        append_band_names(band_names, rgb, citation, palette_color_tiff);
        citation_length = strlen(citation);
        asfRequire (citation_length >= 0 && citation_length <= max_citation_length,
                    "bad citation length");
        // The following is not needed for any but UTM (according to the standard)
        // but it appears that everybody uses it anyway... so we'll write it
        GTIFKeySet (ogtif, PCSCitationGeoKey, TYPE_ASCII, 1, citation);
        // The following is recommended by the standard
        GTIFKeySet (ogtif, GTCitationGeoKey, TYPE_ASCII, 1, citation);
        free (citation);
      }
      break;
      case POLAR_STEREOGRAPHIC:
      {
        GTIFKeySet (ogtif, ProjectedCSTypeGeoKey, TYPE_SHORT, 1,
                    user_defined_value_code);
        GTIFKeySet (ogtif, ProjectionGeoKey, TYPE_SHORT, 1,
                    user_defined_value_code);
        GTIFKeySet (ogtif, ProjCoordTransGeoKey, TYPE_SHORT, 1,
                    CT_PolarStereographic);
        if (meta_is_valid_double(md->projection->param.ps.slon)) {
          GTIFKeySet (ogtif, ProjStraightVertPoleLongGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.ps.slon);
        }
        if (meta_is_valid_double(md->projection->param.ps.slat)) {
          GTIFKeySet (ogtif, ProjNatOriginLatGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.ps.slat);
        }
        if (meta_is_valid_double(md->projection->param.ps.false_easting)) {
          GTIFKeySet (ogtif, ProjFalseEastingGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.ps.false_easting);
        }
        else {
          GTIFKeySet (ogtif, ProjFalseEastingGeoKey, TYPE_DOUBLE, 1, 0.0);
        }
        if (meta_is_valid_double(md->projection->param.ps.false_northing)) {
          GTIFKeySet (ogtif, ProjFalseNorthingGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.ps.false_northing);
        }
        else {
          GTIFKeySet (ogtif, ProjFalseNorthingGeoKey, TYPE_DOUBLE, 1, 0.0);
        }
	GTIFKeySet(ogtif, ProjScaleAtNatOriginGeoKey, TYPE_DOUBLE, 1, 1.0);
        write_datum_key(ogtif, md->projection->datum);
        write_spheroid_key(ogtif, md->projection->spheroid, re_major, re_minor);

        /* Set the citation key.  */
        char datum_str[256];
        datum_2_string (datum_str, md->projection->datum);
        citation = MALLOC ((max_citation_length + 1) * sizeof (char));
        if (md->projection->datum != HUGHES_DATUM) {
          snprintf (citation, max_citation_length + 1,
                    "Polar stereographic projected GeoTIFF using %s "
                    "datum written by Alaska Satellite Facility "
                    "tools", datum_str);
          append_band_names(band_names, rgb, citation, palette_color_tiff);
          citation_length = strlen(citation);
          asfRequire (citation_length >= 0 &&
                      citation_length <= max_citation_length,
                      "bad citation length");
        }
        else {
          // Hughes Datum
          // ...Since the datum is user-defined and the GeoTIFF is now delving outside the
          // realm of 'normal' GeoTIFFs, we put all the pertinent projection parameters
          // into the citation strings to help users if their s/w doesn't 'like' user-defined
          // datums.
	  /*
          snprintf (citation, max_citation_length + 1,
                    "Polar stereographic projected GeoTIFF using Hughes "
                    "ellipsoid written by Alaska Satellite Facility "
                    "tools, Natural Origin Latitude %lf, Straight Vertical "
                    "Pole %lf.", md->projection->param.ps.slat,
                    md->projection->param.ps.slon);
          append_band_names(band_names, rgb, citation, palette_color_tiff);
          citation_length = strlen(citation);
          asfRequire (citation_length >= 0 &&
              citation_length <= max_citation_length,
          "bad citation length");
	  */
	  GTIFKeySet(ogtif, GeographicTypeGeoKey, TYPE_SHORT, 1, 4054);
	  sprintf(citation, "NSIDC Sea Ice Polar Stereographic North");
        }
        GTIFKeySet (ogtif, PCSCitationGeoKey, TYPE_ASCII, 1, citation);
        GTIFKeySet (ogtif, GTCitationGeoKey, TYPE_ASCII, 1, citation);
        free (citation);
      }
      break;
      case LAMBERT_AZIMUTHAL_EQUAL_AREA:
      {
        GTIFKeySet (ogtif, ProjectedCSTypeGeoKey, TYPE_SHORT, 1,
                    user_defined_value_code);
        GTIFKeySet (ogtif, ProjectionGeoKey, TYPE_SHORT, 1,
                    user_defined_value_code);
        GTIFKeySet (ogtif, ProjCoordTransGeoKey, TYPE_SHORT, 1,
                    CT_LambertAzimEqualArea);
        if (meta_is_valid_double(md->projection->param.lamaz.center_lon)) {
          GTIFKeySet (ogtif, ProjCenterLongGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.lamaz.center_lon);
        }
        if (meta_is_valid_double(md->projection->param.lamaz.center_lat)) {
          GTIFKeySet (ogtif, ProjCenterLatGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.lamaz.center_lat);
        }
        if (meta_is_valid_double(md->projection->param.lamaz.false_easting)) {
          GTIFKeySet (ogtif, ProjFalseEastingGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.lamaz.false_easting);
        }
        else {
          GTIFKeySet (ogtif, ProjFalseEastingGeoKey, TYPE_DOUBLE, 1, 0.0);
        }
        if (meta_is_valid_double(md->projection->param.lamaz.false_northing)) {
          GTIFKeySet (ogtif, ProjFalseNorthingGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.lamaz.false_northing);
        }
        else {
          GTIFKeySet (ogtif, ProjFalseNorthingGeoKey, TYPE_DOUBLE, 1, 0.0);
        }
        write_datum_key(ogtif, md->projection->datum);
        write_spheroid_key(ogtif, md->projection->spheroid, re_major, re_minor);

        /* Set the citation key.  */
        char datum_str[256];
        datum_2_string (datum_str, md->projection->datum);
        citation = MALLOC ((max_citation_length + 1) * sizeof (char));
        snprintf (citation, max_citation_length + 1,
                  "Lambert azimuthal equal area projected GeoTIFF using "
                  "%s %s written by Alaska Satellite "
                      "Facility tools.", datum_str,
                  md->projection->datum == HUGHES_DATUM ? "ellipsoid" : "datum");
        append_band_names(band_names, rgb, citation, palette_color_tiff);
        citation_length = strlen(citation);
        asfRequire (citation_length >= 0 &&
            citation_length <= max_citation_length,
                "bad citation length");
        // The following is not needed for any but UTM (according to the standard)
        // but it appears that everybody uses it anyway... so we'll write it
        GTIFKeySet (ogtif, PCSCitationGeoKey, TYPE_ASCII, 1, citation);
        // The following is recommended by the standard
        GTIFKeySet (ogtif, GTCitationGeoKey, TYPE_ASCII, 1, citation);
        free (citation);
      }
        break;
      case EQUI_RECTANGULAR:
      {
        GTIFKeySet (ogtif, ProjectedCSTypeGeoKey, TYPE_SHORT, 1,
                    user_defined_value_code);
        GTIFKeySet (ogtif, ProjectionGeoKey, TYPE_SHORT, 1,
                    user_defined_value_code);
        GTIFKeySet (ogtif, ProjCoordTransGeoKey, TYPE_SHORT, 1,
                    CT_Equirectangular);
	GTIFKeySet (ogtif, ProjStdParallel1GeoKey, TYPE_DOUBLE, 1, 0.0);
        if (meta_is_valid_double(md->projection->param.eqr.central_meridian)) {
          GTIFKeySet (ogtif, ProjCenterLongGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.eqr.central_meridian);
        }
        if (meta_is_valid_double(md->projection->param.eqr.orig_latitude)) {
          GTIFKeySet (ogtif, ProjCenterLatGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.eqr.orig_latitude);
        }
        if (meta_is_valid_double(md->projection->param.eqr.false_easting)) {
          GTIFKeySet (ogtif, ProjFalseEastingGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.eqr.false_easting);
        }
        else {
          GTIFKeySet (ogtif, ProjFalseEastingGeoKey, TYPE_DOUBLE, 1, 0.0);
        }
        if (meta_is_valid_double(md->projection->param.eqr.false_northing)) {
          GTIFKeySet (ogtif, ProjFalseNorthingGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.eqr.false_northing);
        }
        else {
          GTIFKeySet (ogtif, ProjFalseNorthingGeoKey, TYPE_DOUBLE, 1, 0.0);
        }
        write_datum_key(ogtif, md->projection->datum);
        write_spheroid_key(ogtif, md->projection->spheroid, re_major, re_minor);

        /* Set the citation key.  */
        char datum_str[256];
        datum_2_string (datum_str, md->projection->datum);
        citation = MALLOC ((max_citation_length + 1) * sizeof (char));
        snprintf (citation, max_citation_length + 1,
                  "Equi-rectangular projected GeoTIFF using "
                  "%s %s written by Alaska Satellite "
                      "Facility tools.", datum_str,
                  md->projection->datum == HUGHES_DATUM ? "ellipsoid" : "datum");
        append_band_names(band_names, rgb, citation, palette_color_tiff);
        citation_length = strlen(citation);
        asfRequire (citation_length >= 0 &&
            citation_length <= max_citation_length,
                "bad citation length");
        // The following is not needed for any but UTM (according to the standard)
        // but it appears that everybody uses it anyway... so we'll write it
        GTIFKeySet (ogtif, PCSCitationGeoKey, TYPE_ASCII, 1, citation);
        // The following is recommended by the standard
        GTIFKeySet (ogtif, GTCitationGeoKey, TYPE_ASCII, 1, citation);
        free (citation);
      }
        break;
      case EQUIDISTANT:
      {
	GTIFKeySet (ogtif, GeogEllipsoidGeoKey, TYPE_SHORT, 1,
		    md->projection->spheroid);
        GTIFKeySet (ogtif, ProjectedCSTypeGeoKey, TYPE_SHORT, 1,
                    user_defined_value_code);
        GTIFKeySet (ogtif, ProjectionGeoKey, TYPE_SHORT, 1,
                    user_defined_value_code);
        GTIFKeySet (ogtif, ProjCoordTransGeoKey, TYPE_SHORT, 1,
                    32663);
        if (meta_is_valid_double(md->projection->param.eqc.central_meridian)) {
          GTIFKeySet (ogtif, ProjCenterLongGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.eqc.central_meridian);
        }
        if (meta_is_valid_double(md->projection->param.eqc.orig_latitude)) {
          GTIFKeySet (ogtif, ProjCenterLatGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.eqc.orig_latitude);
	}
        write_datum_key(ogtif, md->projection->datum);
        write_spheroid_key(ogtif, md->projection->spheroid, re_major, re_minor);

        /* Set the citation key.  */
        char datum_str[256];
        datum_2_string (datum_str, md->projection->datum);
        citation = MALLOC ((max_citation_length + 1) * sizeof (char));
        snprintf (citation, max_citation_length + 1,
                  "WGS 84 / World Equidistant Cylindrical");
        citation_length = strlen(citation);
        asfRequire (citation_length >= 0 &&
            citation_length <= max_citation_length,
                "bad citation length");
        // The following is not needed for any but UTM (according to the standard)
        // but it appears that everybody uses it anyway... so we'll write it
        GTIFKeySet (ogtif, PCSCitationGeoKey, TYPE_ASCII, 1, citation);
        // The following is recommended by the standard
        GTIFKeySet (ogtif, GTCitationGeoKey, TYPE_ASCII, 1, citation);
        free (citation);
      }
        break;
      case MERCATOR:
      {
        GTIFKeySet (ogtif, ProjectedCSTypeGeoKey, TYPE_SHORT, 1,
                    user_defined_value_code);
        GTIFKeySet (ogtif, ProjectionGeoKey, TYPE_SHORT, 1,
                    user_defined_value_code);
        GTIFKeySet (ogtif, ProjCoordTransGeoKey, TYPE_SHORT, 1,
                    CT_Mercator);
        if (meta_is_valid_double(md->projection->param.mer.central_meridian)) {
          GTIFKeySet (ogtif, ProjNatOriginLongGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.mer.central_meridian);
        }
        if (meta_is_valid_double(md->projection->param.mer.orig_latitude)) {
          GTIFKeySet (ogtif, ProjNatOriginLatGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.mer.orig_latitude);
        }
        if (meta_is_valid_double(md->projection->param.mer.standard_parallel)) {
	  // GeoTIFF only supports the scale factor version.
	  // Hence some fancy calculation
	  double lat = md->projection->param.mer.orig_latitude;
	  double lat1 = md->projection->param.mer.standard_parallel;
	  double re = md->projection->re_major;
	  double rp = md->projection->re_minor;
	  double e2 = sqrt(1.0 - rp*rp/(re*re));
	  double scale = (sqrt(1.0 - e2*sin(lat)*sin(lat))/cos(lat)) *
	    (cos(lat1)/sqrt(1.0 - e2*sin(lat1)*sin(lat1)));

          GTIFKeySet (ogtif, ProjScaleAtNatOriginGeoKey, TYPE_DOUBLE, 1, scale);
        }
        if (meta_is_valid_double(md->projection->param.mer.false_easting)) {
          GTIFKeySet (ogtif, ProjFalseEastingGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.mer.false_easting);
        }
        else {
          GTIFKeySet (ogtif, ProjFalseEastingGeoKey, TYPE_DOUBLE, 1, 0.0);
        }
        if (meta_is_valid_double(md->projection->param.mer.false_northing)) {
          GTIFKeySet (ogtif, ProjFalseNorthingGeoKey, TYPE_DOUBLE, 1,
                      md->projection->param.mer.false_northing);
        }
        else {
          GTIFKeySet (ogtif, ProjFalseNorthingGeoKey, TYPE_DOUBLE, 1, 0.0);
        }
        write_datum_key(ogtif, md->projection->datum);
        write_spheroid_key(ogtif, md->projection->spheroid, re_major, re_minor);

        /* Set the citation key.  */
        char datum_str[256];
        datum_2_string (datum_str, md->projection->datum);
        citation = MALLOC ((max_citation_length + 1) * sizeof (char));
        snprintf (citation, max_citation_length + 1,
                  "Mercator projected GeoTIFF using "
                  "%s %s written by Alaska Satellite "
                      "Facility tools.", datum_str,
                  md->projection->datum == HUGHES_DATUM ? "ellipsoid" : "datum");
        append_band_names(band_names, rgb, citation, palette_color_tiff);
        citation_length = strlen(citation);
        asfRequire (citation_length >= 0 &&
            citation_length <= max_citation_length,
                "bad citation length");
        // The following is not needed for any but UTM (according to the standard)
        // but it appears that everybody uses it anyway... so we'll write it
        GTIFKeySet (ogtif, PCSCitationGeoKey, TYPE_ASCII, 1, citation);
        // The following is recommended by the standard
        GTIFKeySet (ogtif, GTCitationGeoKey, TYPE_ASCII, 1, citation);
        free (citation);
      }
        break;
      case SINUSOIDAL:
	{
	  GTIFKeySet (ogtif, ProjectedCSTypeGeoKey, TYPE_SHORT, 1,
		      user_defined_value_code);
	  GTIFKeySet (ogtif, ProjectionGeoKey, TYPE_SHORT, 1,
		      user_defined_value_code);
	  GTIFKeySet (ogtif, ProjCoordTransGeoKey, TYPE_SHORT, 1,
		      CT_Sinusoidal);
	  if (meta_is_valid_double(md->projection->param.sin.longitude_center))
	    GTIFKeySet (ogtif, ProjCenterLongGeoKey, TYPE_DOUBLE, 1,
			md->projection->param.sin.longitude_center);
	  if (meta_is_valid_double(md->projection->param.sin.false_easting))
	    GTIFKeySet (ogtif, ProjFalseEastingGeoKey, TYPE_DOUBLE, 1,
			md->projection->param.sin.false_easting);
	  else
	    GTIFKeySet (ogtif, ProjFalseEastingGeoKey, TYPE_DOUBLE, 1, 0.0);
	  if (meta_is_valid_double(md->projection->param.sin.false_northing))
	    GTIFKeySet (ogtif, ProjFalseNorthingGeoKey, TYPE_DOUBLE, 1,
			md->projection->param.sin.false_northing);
	  else
	    GTIFKeySet (ogtif, ProjFalseNorthingGeoKey, TYPE_DOUBLE, 1, 0.0);

	  // Write spherical paramters
	  GTIFKeySet (ogtif, GeogEllipsoidGeoKey, TYPE_SHORT, 1,
		      user_defined_value_code);
	  GTIFKeySet (ogtif, GeogSemiMajorAxisGeoKey, TYPE_DOUBLE, 1,
		      md->projection->re_major);
	  GTIFKeySet (ogtif, GeogInvFlatteningGeoKey, TYPE_DOUBLE, 1, 0.0);

	  /* Set the citation key.  */
	  //char datum_str[256];
	  //datum_2_string (datum_str, md->projection->datum);
	  citation = MALLOC ((max_citation_length + 1) * sizeof (char));
	  snprintf (citation, max_citation_length + 1,
		    "Sinusoidal projected GeoTIFF using "
		    "sphere written by Alaska Satellite "
		    "Facility tools.");
	  append_band_names(band_names, rgb, citation, palette_color_tiff);
	  citation_length = strlen(citation);
	  asfRequire (citation_length >= 0 &&
		      citation_length <= max_citation_length,
		      "bad citation length");
	  GTIFKeySet (ogtif, PCSCitationGeoKey, TYPE_ASCII, 1, citation);
	  GTIFKeySet (ogtif, GTCitationGeoKey, TYPE_ASCII, 1, citation);
	  free (citation);
	}
	break;
      case LAT_LONG_PSEUDO_PROJECTION:
        {
	  write_datum_key(ogtif, md->projection->datum);
	  write_spheroid_key(ogtif, md->projection->spheroid, re_major, re_minor);
	}
	break;
      default:
        asfPrintWarning ("Unsupported map projection found.  TIFF file will not\n"
            "contain projection information.\n");
	free(citation);
        break;
    }
  }

  // NOTE: GTIFWriteKeys() must be called to finalize the writing of geokeys
  // to the GeoTIFF file ...see finalize_tiff_file() ...do not insert a call
  // to GTIFWriteKeys() here plz.

  meta_free (md);

  return ogtif;
}

void finalize_tiff_file(TIFF *otif, GTIF *ogtif, int is_geotiff)
{
  // Finalize the GeoTIFF
  if (is_geotiff && ogtif != NULL) {
    int ret;

    ret = GTIFWriteKeys (ogtif);
    asfRequire (ret, "Error writing GeoTIFF keys.\n");
    GTIFFree (ogtif);
  }

  // Finalize the TIFF file
  if (otif != NULL) {
    XTIFFClose (otif);
  }
}

void finalize_jpeg_file(FILE *ojpeg, struct jpeg_compress_struct *cinfo)
{
  jpeg_finish_compress (cinfo);
  FCLOSE (ojpeg);
  jpeg_destroy_compress (cinfo);
}

void finalize_png_file(FILE *opng, png_structp png_ptr, png_infop info_ptr)
{
    png_write_end(png_ptr, NULL);
    png_destroy_write_struct(&png_ptr, &info_ptr);
    FCLOSE(opng);
}

void finalize_ppm_file(FILE *oppm)
{
  FCLOSE(oppm);
}

// Function to determine whether the output image will be a multiband but not RGB image
int multiband(char *format, char **band_name, int band_count)
{
  int ii, nBands=0;

  if (strcmp_case(format, "HDF5") != 0 &&
      strcmp_case(format, "netCDF") != 0)
    return FALSE;

  for (ii=0; ii<band_count; ii++) {
    if (band_name[ii] && strlen(band_name[ii]) > 0)
      nBands++;
    else
      break;
  }
  if (nBands > 1)
    return TRUE;
  else
    return FALSE;
}

void
export_band_image (const char *metadata_file_name,
                   const char *image_data_file_name,
                   char *output_file_name,
                   scale_t sample_mapping,
                   char **band_name, int rgb,
                   int true_color, int false_color,
                   char *look_up_table_name,
                   output_format_t format,
                   int *noutputs,
                   char ***output_names)
{
  int map_projected;
  int is_geotiff = 1;
  TIFF *otif = NULL; // FILE* pointer for TIFF files
  GTIF *ogtif = NULL;
  FILE *ojpeg = NULL, *opgm=NULL, *opng=NULL, *ofp=NULL;
  struct jpeg_compress_struct cinfo;
  png_structp png_ptr;
  png_infop png_info_ptr;
  h5_t *h5=NULL;
  netcdf_t *netcdf=NULL;
  float *nc = NULL;
  float *hdf = NULL;
  int ii,jj;
  int palette_color_tiff = 0;
  int have_look_up_table = look_up_table_name && strlen(look_up_table_name)>0;
  char *lut_file = NULL;

  meta_parameters *md = meta_read (metadata_file_name);
  map_projected = is_map_projected(md);

  if (format == PNG_GE)
    meta_write(md, output_file_name);

  if (format == HDF && rgb)
    asfPrintError("Export to a color HDF format is not supported!\n");
  else if (format == NC && rgb)
    asfPrintError("Export to a color netCDF format is not supported!\n");

  if (md->general->image_data_type >= POLARIMETRIC_C2_MATRIX &&
      md->general->image_data_type <= POLARIMETRIC_T4_MATRIX &&
      md->general->image_data_type != POLARIMETRIC_DECOMPOSITION &&
      format == POLSARPRO_HDR)
    append_ext_if_needed(output_file_name, ".bin", NULL);

  asfRequire( !(look_up_table_name == NULL &&
                sample_mapping == TRUNCATE &&
                (md->general->radiometry == r_SIGMA ||
                 md->general->radiometry == r_BETA  ||
                 md->general->radiometry == r_GAMMA)
               ),
              "Downsampling a Sigma, Beta, or Gamma type image (power or dB)\n"
              "from floating point to byte using truncation is not supported.\n"
              "All values would map to black.\n");
  if (md->general->data_type == BYTE &&
      sample_mapping != TRUNCATE && sample_mapping != NONE &&
      md->general->image_data_type != BROWSE_IMAGE)
  {
      asfPrintWarning("Using %s sample remapping on BYTE data will result in\n"
                      "contrast expansion.  If you do not want contrast expansion in\n"
                      "your exported file, then you need to select either TRUNCATE or\n"
                      "NONE for your sample remapping type.\n",
                      sample_mapping2string(sample_mapping));
  }

  if (md->general->band_count < 1 || md->general->band_count > MAX_BANDS) {
    asfPrintError ("Unsupported number of channels found (%d).  Only 1 through\n"
        "%d channels are supported.\n", md->general->band_count, MAX_BANDS);
  }

  if (format == PGM && look_up_table_name != NULL && strlen(look_up_table_name) > 0) {
    asfPrintWarning("Cannot apply look up table to PGM format output files since\n"
        "color is not supported ...Ignoring the look up table and continuing.\n");
    have_look_up_table = 0;
  }

  // NOTE: if the truecolorFlag or falsecolorFlag was set, then 'rgb' is true
  // and the band assignments are in the band_name[] array already.  The true_color
  // and false_color parameters are provided separately just in case we decide
  // to do anything different, e.g. normal rgb processing plus something specific
  // to true_color or false_color (like contrast expansion)
  if (strstr(uc(md->general->bands), "POLSARPRO") != NULL && format == PGM) {
    asfPrintWarning(
        "Using PGM output for an image containing a PolSARpro classification\n"
        "band will result in separate greyscale images, and the PolSARpro classification\n"
        "will appear very DARK since all values in the image are small integers.  It is\n"
        "best to use a viewer that can apply the appropriate classification look-up table\n"
        "to the image, i.e. asf_view, a part of the ASF tool set.\n");
  }

  if (have_look_up_table) {
    lut_file = STRDUP(look_up_table_name);
  }
  else {
    // No look-up table
    lut_file = (char*)CALLOC(256, sizeof(char)); // Empty string
    if (format != PGM) {
      if (md->colormap) {
        // No look up table was provided for colormapped output ...Use the embedded
        // colormap that is in the metadata
        strcpy(lut_file, "tmp_lut_file.lut");
        colormap_to_lut_file(md->colormap, lut_file);
        have_look_up_table = TRUE;
        asfPrintStatus("\nUsing the colormap embedded in the ASF metadata (%s).\n"
            "for applicable bands.\n\n",
            md->colormap->look_up_table);
      }
    }
  }

  if (rgb && !have_look_up_table) {
    // Initialize the selected format
    if (format == TIF) {
      is_geotiff = 0;
      initialize_tiff_file(&otif, &ogtif, output_file_name,
         metadata_file_name, is_geotiff,
         sample_mapping, rgb, &palette_color_tiff, band_name, lut_file, 0);
    }
    else if (format == GEOTIFF) {
      initialize_tiff_file(&otif, &ogtif, output_file_name,
         metadata_file_name, is_geotiff,
         sample_mapping, rgb, &palette_color_tiff, band_name, lut_file, 0);
    }
    else if (format == JPEG) {
      initialize_jpeg_file(output_file_name, md, &ojpeg, &cinfo, rgb);
    }
    else if (format == PNG) {
      initialize_png_file(output_file_name, md, &opng, &png_ptr,
          &png_info_ptr, rgb);
    }
    else if (format == PNG_ALPHA) {
      initialize_png_file_ext(output_file_name, md, &opng, &png_ptr,
			      &png_info_ptr, rgb, TRUE);
    }
    else if (format == PNG_GE) {
      initialize_png_file_ext(output_file_name, md, &opng, &png_ptr,
			      &png_info_ptr, rgb, 2);
    }
    int ignored[4] = {0, 0, 0, 0};
    int red_channel=-1, green_channel=-1, blue_channel=-1;
    for (ii = 0; ii < 4; ii++) {
        if (ii < md->general->band_count) {
            ignored[ii] = strncmp("IGNORE", uc(band_name[ii]), 6) == 0 ? 1 : 0;
        }
        else {
            // Ignore bands that exceed band count
            ignored[ii] = 1;
        }
    }
    red_channel = get_band_number(md->general->bands,
                                  md->general->band_count,
                                  band_name[0]);
    if (!ignored[0] && !(red_channel >= 0 && red_channel < MAX_BANDS)) {
      asfPrintError("Band number (%d) out of range for %s channel.\n",
                    red_channel, "red");
    }
    green_channel = get_band_number(md->general->bands,
                                    md->general->band_count,
                                    band_name[1]);
    if (!ignored[1] && !(green_channel >= 0 && green_channel < MAX_BANDS)) {
      asfPrintError("Band number (%d) out of range for %s channel.\n",
                    green_channel, "green");
    }
    blue_channel = get_band_number(md->general->bands,
                                   md->general->band_count,
                                   band_name[2]);
    if (!ignored[2] && !(blue_channel >= 0 && blue_channel < MAX_BANDS)) {
      asfPrintError("Band number (%d) out of range for %s channel.\n",
                    blue_channel, "blue");
    }

    channel_stats_t red_stats, blue_stats, green_stats;
    red_stats.hist = NULL; red_stats.hist_pdf = NULL;
    green_stats.hist = NULL; green_stats.hist_pdf = NULL;
    blue_stats.hist = NULL; blue_stats.hist_pdf = NULL;

    if (!md->optical) {
      asfRequire (sizeof(unsigned char) == 1,
                  "Size of the unsigned char data type on this machine is "
                  "different than expected.\n");

        /*** Normal straight per-channel stats (no combined-band stats) */

        // Red channel statistics
        if (!ignored[red_channel]                           &&  // Non-blank band
            sample_mapping != NONE                          &&  // Float-to-byte resampling needed
            sample_mapping != HISTOGRAM_EQUALIZE            &&  // A histogram is not needed
            md->stats      != NULL                          &&  // Stats exist and are valid
            md->stats       > 0                             &&
            meta_is_valid_string(band_name[0])              &&  // Band name exists and is valid
            strlen(band_name[0]) > 0)
        {
          // If the stats already exist, then use them
          int band_no = get_band_number(md->general->bands,
                                        md->general->band_count,
                                        band_name[0]);
          red_stats.min  = md->stats->band_stats[band_no].min;
          red_stats.max  = md->stats->band_stats[band_no].max;
          red_stats.mean = md->stats->band_stats[band_no].mean;
          red_stats.standard_deviation = md->stats->band_stats[band_no].std_deviation;
          red_stats.hist     = NULL;
          red_stats.hist_pdf = NULL;
          if (sample_mapping == SIGMA) {
            double omin = red_stats.mean - 2*red_stats.standard_deviation;
            double omax = red_stats.mean + 2*red_stats.standard_deviation;
            if (omin > red_stats.min) red_stats.min = omin;
            if (omax < red_stats.max) red_stats.max = omax;
          }
	  else if (sample_mapping == MINMAX_MEDIAN)
	    calc_minmax_median(image_data_file_name, band_name[0],
			       md->general->no_data,
			       &red_stats.min, &red_stats.max);
        }
        else {
          // Calculate the stats if you have to...
          if (sample_mapping != NONE && !ignored[red_channel]) { // byte image
            asfPrintStatus("\nGathering red channel statistics ...\n");
            calc_stats_from_file(image_data_file_name, band_name[0],
                                md->general->no_data,
                                &red_stats.min, &red_stats.max, &red_stats.mean,
                                &red_stats.standard_deviation, &red_stats.hist);
            if (sample_mapping == SIGMA) {
              double omin = red_stats.mean - 2*red_stats.standard_deviation;
              double omax = red_stats.mean + 2*red_stats.standard_deviation;
              if (omin > red_stats.min) red_stats.min = omin;
              if (omax < red_stats.max) red_stats.max = omax;
            }
            else if ( sample_mapping == HISTOGRAM_EQUALIZE ) {
              red_stats.hist_pdf = gsl_histogram_pdf_alloc (256);
              gsl_histogram_pdf_init (red_stats.hist_pdf, red_stats.hist);
            }
	    else if (sample_mapping == MINMAX_MEDIAN)
	      calc_minmax_median(image_data_file_name, band_name[0],
				 md->general->no_data,
				 &red_stats.min, &red_stats.max);
          }
        }

        // Green channel statistics
        if (!ignored[green_channel]                          &&  // Non-blank band
             sample_mapping != NONE                          &&  // Float-to-byte resampling needed
             sample_mapping != HISTOGRAM_EQUALIZE            &&  // A histogram is not needed
             md->stats      != NULL                          &&  // Stats exist and are valid
             md->stats       > 0                             &&
             meta_is_valid_string(band_name[1])              &&  // Band name exists and is valid
             strlen(band_name[1]) > 0)
        {
          // If the stats already exist, then use them
          int band_no = get_band_number(md->general->bands,
                                        md->general->band_count,
                                        band_name[1]);
          green_stats.min  = md->stats->band_stats[band_no].min;
          green_stats.max  = md->stats->band_stats[band_no].max;
          green_stats.mean = md->stats->band_stats[band_no].mean;
          green_stats.standard_deviation = md->stats->band_stats[band_no].std_deviation;
          green_stats.hist     = NULL;
          green_stats.hist_pdf = NULL;
          if (sample_mapping == SIGMA) {
            double omin = green_stats.mean - 2*green_stats.standard_deviation;
            double omax = green_stats.mean + 2*green_stats.standard_deviation;
            if (omin > green_stats.min) green_stats.min = omin;
            if (omax < green_stats.max) green_stats.max = omax;
          }
	  else if (sample_mapping == MINMAX_MEDIAN)
	    calc_minmax_median(image_data_file_name, band_name[1],
			       md->general->no_data,
			       &green_stats.min, &green_stats.max);
        }
        else {
          // Calculate the stats if you have to...
          if (sample_mapping != NONE && !ignored[green_channel]) { // byte image
            asfPrintStatus("\nGathering green channel statistics ...\n");
            calc_stats_from_file(image_data_file_name, band_name[1],
                                md->general->no_data,
                                &green_stats.min, &green_stats.max,
                                &green_stats.mean,
                                &green_stats.standard_deviation,
                                &green_stats.hist);
            if (sample_mapping == SIGMA) {
              double omin = green_stats.mean - 2*green_stats.standard_deviation;
              double omax = green_stats.mean + 2*green_stats.standard_deviation;
              if (omin > green_stats.min) green_stats.min = omin;
              if (omax < green_stats.max) green_stats.max = omax;
            }
            else if ( sample_mapping == HISTOGRAM_EQUALIZE ) {
              green_stats.hist_pdf = gsl_histogram_pdf_alloc(256);
              gsl_histogram_pdf_init (green_stats.hist_pdf, green_stats.hist);
            }
	    else if (sample_mapping == MINMAX_MEDIAN)
	      calc_minmax_median(image_data_file_name, band_name[1],
				 md->general->no_data,
				 &green_stats.min, &green_stats.max);
          }
        }

        // Blue channel statistics
        if (!ignored[blue_channel]                          &&  // Non-blank band
             sample_mapping != NONE                         &&  // Float-to-byte resampling needed
             sample_mapping != HISTOGRAM_EQUALIZE           &&  // A histogram is not needed
             md->stats      != NULL                         &&  // Stats exist and are valid
             md->stats       > 0                            &&
             meta_is_valid_string(band_name[2])             &&  // Band name exists and is valid
             strlen(band_name[2]) > 0)
        {
          // If the stats already exist, then use them
          int band_no = get_band_number(md->general->bands,
                                        md->general->band_count,
                                        band_name[2]);
          blue_stats.min  = md->stats->band_stats[band_no].min;
          blue_stats.max  = md->stats->band_stats[band_no].max;
          blue_stats.mean = md->stats->band_stats[band_no].mean;
          blue_stats.standard_deviation = md->stats->band_stats[band_no].std_deviation;
          blue_stats.hist     = NULL;
          blue_stats.hist_pdf = NULL;
          if (sample_mapping == SIGMA) {
            double omin = blue_stats.mean - 2*blue_stats.standard_deviation;
            double omax = blue_stats.mean + 2*blue_stats.standard_deviation;
            if (omin > blue_stats.min) blue_stats.min = omin;
            if (omax < blue_stats.max) blue_stats.max = omax;
          }
	  else if (sample_mapping == MINMAX_MEDIAN)
	    calc_minmax_median(image_data_file_name, band_name[2],
			       md->general->no_data,
			       &blue_stats.min, &blue_stats.max);
        }
        else {
          // Calculate the stats if you have to...
          if (sample_mapping != NONE && !ignored[blue_channel]) { // byte image
            asfPrintStatus("\nGathering blue channel statistics ...\n");
            calc_stats_from_file(image_data_file_name, band_name[2],
                                md->general->no_data,
                                &blue_stats.min, &blue_stats.max,
                                &blue_stats.mean,
                                &blue_stats.standard_deviation,
                                &blue_stats.hist);
            if (sample_mapping == SIGMA) {
              double omin = blue_stats.mean - 2*blue_stats.standard_deviation;
              double omax = blue_stats.mean + 2*blue_stats.standard_deviation;
              if (omin > blue_stats.min) blue_stats.min = omin;
              if (omax < blue_stats.max) blue_stats.max = omax;
            }
            else if ( sample_mapping == HISTOGRAM_EQUALIZE ) {
              blue_stats.hist_pdf = gsl_histogram_pdf_alloc (256);
              gsl_histogram_pdf_init (blue_stats.hist_pdf, blue_stats.hist);
            }
	    else if (sample_mapping == MINMAX_MEDIAN)
	      calc_minmax_median(image_data_file_name, band_name[2],
				 md->general->no_data,
				 &blue_stats.min, &blue_stats.max);
          }
        }
    }

    float *red_float_line = NULL;
    float *green_float_line = NULL;
    float *blue_float_line = NULL;

    unsigned char *red_byte_line = NULL;
    unsigned char *green_byte_line = NULL;
    unsigned char *blue_byte_line = NULL;

    // Write the data to the file
    FILE *fp = FOPEN(image_data_file_name, "rb");

    int sample_count = md->general->sample_count;
    int offset = md->general->line_count;

    // Allocate some memory
    if (md->optical || md->general->data_type == BYTE) {
      if (ignored[red_channel])
        red_byte_line = (unsigned char *) CALLOC(sample_count, sizeof(char));
      else
        red_byte_line = (unsigned char *) MALLOC(sample_count * sizeof(char));

      if (ignored[green_channel])
        green_byte_line = (unsigned char *) CALLOC(sample_count, sizeof(char));
      else
        green_byte_line = (unsigned char *) MALLOC(sample_count * sizeof(char));

      if (ignored[blue_channel])
        blue_byte_line = (unsigned char *) CALLOC(sample_count, sizeof(char));
      else
        blue_byte_line = (unsigned char *) MALLOC(sample_count * sizeof(char));
    }
    else {
      // Not optical data
      red_float_line = (float *) MALLOC(sample_count * sizeof(float));
      if (ignored[red_channel]){
        for (ii=0; ii<sample_count; ++ii) {
          red_float_line[ii] = md->general->no_data;
        }
      }

      green_float_line = (float *) MALLOC(sample_count * sizeof(float));
      if (ignored[green_channel]) {
        for (ii=0; ii<sample_count; ++ii) {
          green_float_line[ii] = md->general->no_data;
        }
      }

      blue_float_line = (float *) MALLOC(sample_count * sizeof(float));
      if (ignored[blue_channel]) {
        for (ii=0; ii<sample_count; ++ii) {
          blue_float_line[ii] = md->general->no_data;
        }
      }
    }

    double r_omin=0, r_omax=0;
    double g_omin=0, g_omax=0;
    double b_omin=0, b_omax=0;

    if (md->optical && (true_color || false_color)) {
      // NOTE: Using the stats from the metadata, if available, is only valid
      // if no histogram is necessary, else one must be generated via the
      // stats functions.  If true_color or false_color are selected, then sample_mapping
      // should NOT be HISTOGRAM_EQUALIZE in particular and should always be set
      // to SIGMA
      if (sample_mapping == NONE && (true_color || false_color)) {
          sample_mapping = SIGMA;
      }
      if (sample_mapping != SIGMA) {
        asfPrintWarning("Cannot combine true or false color options with sample mappings\n"
            "other than 2-sigma.  You selected %s.  Defaulting to 2-sigma...\n",
            sample_mapping == TRUNCATE ? "TRUNCATE" :
            sample_mapping == MINMAX ? "MINMAX" :
            sample_mapping == HISTOGRAM_EQUALIZE ? "HISTOGRAM_EQUALIZE" :
            "UNKNOWN or INVALID");
      }

      asfPrintStatus("\nSampling color channels for 2-sigma contrast-expanded %s output...\n",
                     true_color ? "True Color" : false_color ? "False Color" : "Unknown");

      // Set up red resampling
      if (md->stats                                     &&
          md->stats->band_count >= 3                    &&
          meta_is_valid_string(band_name[0])            &&
          strlen(band_name[0]) > 0                      &&
          sample_mapping != HISTOGRAM_EQUALIZE)
      {
          // If the stats already exist, then use them
        int band_no = get_band_number(md->general->bands,
                                      md->general->band_count,
                                      band_name[0]);
        red_stats.min  = md->stats->band_stats[band_no].min;
        red_stats.max  = md->stats->band_stats[band_no].max;
        red_stats.mean = md->stats->band_stats[band_no].mean;
        red_stats.standard_deviation = md->stats->band_stats[band_no].std_deviation;
        red_stats.hist     = NULL;
        red_stats.hist_pdf = NULL;
      }
      else {
        asfPrintStatus("\nGathering red channel statistics...\n");
        calc_stats_from_file(image_data_file_name, band_name[0],
                             md->general->no_data,
                             &red_stats.min, &red_stats.max, &red_stats.mean,
                             &red_stats.standard_deviation, &red_stats.hist);
      }
      r_omin = red_stats.mean - 2*red_stats.standard_deviation;
      r_omax = red_stats.mean + 2*red_stats.standard_deviation;
      if (r_omin < red_stats.min) r_omin = red_stats.min;
      if (r_omax > red_stats.max) r_omax = red_stats.max;

      // Set up green resampling
      if (md->stats                                       &&
          md->stats->band_count >= 3                      &&
          meta_is_valid_string(band_name[1])              &&
          strlen(band_name[1]) > 0                        &&
          sample_mapping != HISTOGRAM_EQUALIZE)
      {
        // If the stats already exist, then use them
        int band_no = get_band_number(md->general->bands,
                                      md->general->band_count,
                                      band_name[1]);
        green_stats.min  = md->stats->band_stats[band_no].min;
        green_stats.max  = md->stats->band_stats[band_no].max;
        green_stats.mean = md->stats->band_stats[band_no].mean;
        green_stats.standard_deviation = md->stats->band_stats[band_no].std_deviation;
        green_stats.hist     = NULL;
        green_stats.hist_pdf = NULL;
      }
      else {
        asfPrintStatus("\nGathering green channel statistics...\n");
        calc_stats_from_file(image_data_file_name, band_name[1],
                              md->general->no_data,
                              &green_stats.min, &green_stats.max, &green_stats.mean,
                              &green_stats.standard_deviation, &green_stats.hist);
      }
      g_omin = green_stats.mean - 2*green_stats.standard_deviation;
      g_omax = green_stats.mean + 2*green_stats.standard_deviation;
      if (g_omin < green_stats.min) g_omin = green_stats.min;
      if (g_omax > green_stats.max) g_omax = green_stats.max;

      // Set up blue resampling
      if (md->stats                                      &&
          md->stats->band_count >= 3                     &&
          meta_is_valid_string(band_name[2])             &&
          strlen(band_name[2]) > 0                       &&
          sample_mapping != HISTOGRAM_EQUALIZE)
      {
        // If the stats already exist, then use them
        int band_no = get_band_number(md->general->bands,
                                      md->general->band_count,
                                      band_name[2]);
        blue_stats.min  = md->stats->band_stats[band_no].min;
        blue_stats.max  = md->stats->band_stats[band_no].max;
        blue_stats.mean = md->stats->band_stats[band_no].mean;
        blue_stats.standard_deviation = md->stats->band_stats[band_no].std_deviation;
        blue_stats.hist     = NULL;
        blue_stats.hist_pdf = NULL;
      }
      else {
        asfPrintStatus("\nGathering blue channel statistics...\n\n");
        calc_stats_from_file(image_data_file_name, band_name[2],
                             md->general->no_data,
                             &blue_stats.min, &blue_stats.max, &blue_stats.mean,
                             &blue_stats.standard_deviation, &blue_stats.hist);
      }
      b_omin = blue_stats.mean - 2*blue_stats.standard_deviation;
      b_omax = blue_stats.mean + 2*blue_stats.standard_deviation;
      if (b_omin < blue_stats.min) b_omin = blue_stats.min;
      if (b_omax > blue_stats.max) b_omax = blue_stats.max;

      asfPrintStatus("Applying 2-sigma contrast expansion to color bands...\n\n");
    }

    for (ii=0; ii<md->general->line_count; ii++) {
      if (md->optical || md->general->data_type == BYTE) {
        // Optical images come as byte in the first place
        if (!ignored[red_channel])
          get_byte_line(fp, md, ii+red_channel*offset, red_byte_line);
        if (!ignored[green_channel])
          get_byte_line(fp, md, ii+green_channel*offset, green_byte_line);
        if (!ignored[blue_channel])
          get_byte_line(fp, md, ii+blue_channel*offset, blue_byte_line);
        // If true or false color flag was set, then (re)sample with 2-sigma
        // contrast expansion
        if (true_color || false_color) {
          for (jj=0; jj<sample_count; jj++) {
            red_byte_line[jj] =
                pixel_float2byte((float)red_byte_line[jj], SIGMA,
                                  r_omin, r_omax,
                                  red_stats.hist, red_stats.hist_pdf, NAN);
            green_byte_line[jj] =
                pixel_float2byte((float)green_byte_line[jj], SIGMA,
                                  g_omin, g_omax,
                                  green_stats.hist, green_stats.hist_pdf, NAN);
            blue_byte_line[jj] =
                pixel_float2byte((float)blue_byte_line[jj], SIGMA,
                                  b_omin, b_omax,
                                  blue_stats.hist, blue_stats.hist_pdf, NAN);
          }
        }
        if (format == TIF || format == GEOTIFF)
          write_rgb_tiff_byte2byte(otif, red_byte_line, green_byte_line,
                                   blue_byte_line, ii, sample_count);
        else if (format == JPEG)
          write_rgb_jpeg_byte2byte(ojpeg, red_byte_line, green_byte_line,
                                   blue_byte_line, &cinfo, sample_count);
        else if (format == PNG || format == PNG_ALPHA || format == PNG_GE)
          write_rgb_png_byte2byte(opng, red_byte_line, green_byte_line,
                                  blue_byte_line, png_ptr, png_info_ptr,
                                  sample_count);
        else
          asfPrintError("Impossible: unexpected format %s\n", format2str(format));
      }
      else if (sample_mapping == NONE) {
        // Write float->float lines if float image
        if (!ignored[red_channel])
          get_float_line(fp, md, ii+red_channel*offset, red_float_line);
        if (!ignored[green_channel])
          get_float_line(fp, md, ii+green_channel*offset, green_float_line);
        if (!ignored[blue_channel])
          get_float_line(fp, md, ii+blue_channel*offset, blue_float_line);
        if (format == GEOTIFF || format == TIF)
          write_rgb_tiff_float2float(otif, red_float_line, green_float_line,
                                     blue_float_line, ii, sample_count);
        else
          asfPrintError("Impossible: unexpected format %s\n", format2str(format));
      }
      else {
        // Write float->byte lines if byte image
        if (!ignored[red_channel])
          get_float_line(fp, md, ii+red_channel*offset, red_float_line);
        if (!ignored[green_channel])
          get_float_line(fp, md, ii+green_channel*offset, green_float_line);
        if (!ignored[blue_channel])
          get_float_line(fp, md, ii+blue_channel*offset, blue_float_line);
        if (format == TIF || format == GEOTIFF)
          write_rgb_tiff_float2byte(otif, red_float_line, green_float_line,
                                    blue_float_line, red_stats, green_stats,
                                    blue_stats, sample_mapping,
                                    md->general->no_data, ii, sample_count);
        else if (format == JPEG)
          write_rgb_jpeg_float2byte(ojpeg, red_float_line, green_float_line,
                                    blue_float_line, &cinfo, red_stats,
                                    green_stats, blue_stats, sample_mapping,
                                    md->general->no_data, sample_count);
        else if (format == PNG || format == PNG_ALPHA || format == PNG_GE)
          write_rgb_png_float2byte(opng, red_float_line, green_float_line,
                                   blue_float_line, png_ptr, png_info_ptr,
                                   red_stats, green_stats, blue_stats,
                                   sample_mapping, md->general->no_data,
                                   sample_count);
        else
          asfPrintError("Impossible: unexpected format %s\n", format2str(format));
      }

      asfLineMeter(ii, md->general->line_count);
    }

    // Free memory
    FREE(red_byte_line);
    FREE(green_byte_line);
    FREE(blue_byte_line);
    FREE(red_float_line);
    FREE(green_float_line);
    FREE(blue_float_line);

    // Finalize the chosen format
    if (format == TIF || format == GEOTIFF)
      finalize_tiff_file(otif, ogtif, is_geotiff);
    else if (format == JPEG)
      finalize_jpeg_file(ojpeg, &cinfo);
    else if (format == PNG || format == PNG_ALPHA || format == PNG_GE)
      finalize_png_file(opng, png_ptr, png_info_ptr);
    else
      asfPrintError("Impossible: unexpected format %s\n", format2str(format));

    if (red_stats.hist) gsl_histogram_free(red_stats.hist);
    if (red_stats.hist_pdf) gsl_histogram_pdf_free(red_stats.hist_pdf);
    if (green_stats.hist) gsl_histogram_free(green_stats.hist);
    if (green_stats.hist_pdf) gsl_histogram_pdf_free(green_stats.hist_pdf);
    if (blue_stats.hist) gsl_histogram_free(blue_stats.hist);
    if (blue_stats.hist_pdf) gsl_histogram_pdf_free(blue_stats.hist_pdf);

    FCLOSE(fp);

    // set the output filename
    *noutputs = 1;
    char **outs = MALLOC(sizeof(char*));
    outs[0] = STRDUP(output_file_name);
    *output_names = outs;
  }
  else if (multiband(format2str(format), band_name, md->general->band_count)) {
    // Multi-band image output (but no RGB)
    // This can currently only be the case for HDF5 and netCDF data
    hid_t h5_data;

    if (format == HDF) {
      append_ext_if_needed(output_file_name, ".h5", NULL);
      h5 = initialize_h5_file(output_file_name, md);
      hdf = (float *)
	MALLOC(sizeof(float)*md->general->line_count*md->general->sample_count);
    }
    else if (format == NC) {
      append_ext_if_needed(output_file_name, ".nc", NULL);
      netcdf = initialize_netcdf_file(output_file_name, md);
      nc = (float *)
	MALLOC(sizeof(float)*md->general->line_count*md->general->sample_count);    }

    int kk, channel;
    int band_count = md->general->band_count;
    int sample_count = md->general->sample_count;
    int offset = md->general->line_count;
    FILE *fp = FOPEN(image_data_file_name, "rb");
    float *float_line = (float *) MALLOC(sizeof(float) * sample_count);
    for (kk=0; kk<band_count; kk++) {
      for (ii=0; ii<md->general->line_count; ii++ ) {
	channel = get_band_number(md->general->bands, band_count, band_name[kk]);
	get_float_line(fp, md, ii+channel*offset, float_line);
	if (format == HDF) {
	  int sample;
	  for (sample=0; sample<sample_count; sample++)
	    hdf[ii*sample_count+sample] = float_line[sample];
	}
	else if (format == NC) {
	  int sample;
	  for (sample=0; sample<sample_count; sample++) {
	    nc[ii*sample_count+sample] = float_line[sample];
	  }
	}
	asfLineMeter(ii, md->general->line_count);
      }
      if (format == HDF) {
	asfPrintStatus("Storing band '%s' ...\n", band_name[kk]);
	char dataset[50];
	sprintf(dataset, "/data/%s_AMPLITUDE_IMAGE", band_name[kk]);
	h5_data = H5Dopen(h5->file, dataset, H5P_DEFAULT);
	H5Dwrite(h5_data, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL,
		 H5P_DEFAULT, hdf);
	H5Dclose(h5_data);
      }
      else if (format == NC) {
	asfPrintStatus("Storing band '%s' ...\n", band_name[kk]);
	nc_put_var_float(netcdf->ncid, netcdf->var_id[kk], &nc[0]);
      }
    }

    if (format == HDF) {
      finalize_h5_file(h5);
      FREE(hdf);
    }
    else if (format == NC) {
      finalize_netcdf_file(netcdf, md);
      FREE(nc);
    }
    else
      asfPrintError("Impossible: unexpected format %s\n", format2str(format));

    FCLOSE(fp);
  }
  else {
    // Single-band image output (one grayscale file for each available band)
    int free_band_names=FALSE;
    int band_count = md->general->band_count;
    char base_name[255];
    char *bands = (char *) MALLOC(sizeof(char)*1024);
    strcpy(bands, md->general->bands);
    strcpy(base_name, output_file_name);
    char *matrix = (char *) MALLOC(sizeof(char)*5);
    char *decomposition = (char *) MALLOC(sizeof(char)*25);
    char *path_name = (char *) MALLOC(sizeof(char)*1024);
    char *out_file = NULL;

    if (!band_name)
    {
      // caller did not pass in the band names -- we will have
      // to come up with some band names ourselves
      if (band_count == 1) {
        // only one band, just call it "01"
        band_name = (char **) CALLOC(MAX_BANDS, sizeof(char*));
        band_name[0] = (char*) MALLOC(sizeof(char)*100);
        strcpy(band_name[0], "01");
      }
      else if (have_look_up_table) {
        // when exporting a look up table, number the bands
        band_name = (char **) CALLOC(MAX_BANDS, sizeof(char*));
        int i;
        for (i=0; i<3; i++) {
          band_name[i] = (char*) MALLOC(sizeof(char)*100);
          sprintf(band_name[i], "%02d", i + 1);
        }
      }
      else {
        // get what is in the metadata
        int n;
        char *b = stripExt(image_data_file_name);
        band_name = find_single_band(b, "all", &n);
        asfRequire (n == band_count, "Band count inconsistent: %d != %d\n",
                    n, band_count);
        FREE(b);
      }

      // in all three cases, we must free "band_name"
      // (normally not freed, it the caller's)
      free_band_names = TRUE;
    }

    if (md->general->image_data_type >= POLARIMETRIC_C2_MATRIX &&
	md->general->image_data_type <= POLARIMETRIC_T4_MATRIX) {
      if (strstr(md->general->bands, "C44"))
	sprintf(matrix, "C4");
      else if (strstr(md->general->bands, "C33"))
	sprintf(matrix, "C3");
      else if (strstr(md->general->bands, "C22"))
	sprintf(matrix, "C2");
      else if (strstr(md->general->bands, "T44"))
	sprintf(matrix, "T4");
      else if (strstr(md->general->bands, "T33"))
	sprintf(matrix, "T3");
      else if (strstr(md->general->bands, "T22"))
	sprintf(matrix, "T2");
      else
	asfPrintError("The bands do not correspond to matrix type (%s)\n",
		      image_data_type2str(md->general->image_data_type));
    }

    // If we are dealing with polarimetric matrices, the output file name
    // becomes the name of an output directory. We need to figure out from
    // the bands string, what kind of matrix we have, because we need to
    // create the appropriate subdirectory. Otherwise, PolSARPro can't handle
    // the files out of the box.
    if (md->general->image_data_type >= POLARIMETRIC_C2_MATRIX &&
	md->general->image_data_type <= POLARIMETRIC_T4_MATRIX &&
	md->general->band_count != 1 && format == POLSARPRO_HDR) {
      char *dirName = (char *) MALLOC(sizeof(char)*1024);
      char *fileName = (char *) MALLOC(sizeof(char)*1024);
      split_dir_and_file(output_file_name, dirName, fileName);
      char *path = get_dirname(output_file_name);
      if (strlen(dirName) <= 0) {
	path = g_get_current_dir();
	sprintf(path_name, "%s%c%s%c%s",
		path, DIR_SEPARATOR, output_file_name, DIR_SEPARATOR, matrix);
      }
      else
	sprintf(path_name, "%s%c%s%c%s",
		dirName, DIR_SEPARATOR, fileName, DIR_SEPARATOR, matrix);
      if (is_dir(path_name))
	asfPrintError("Output directory (%s) already exists.\n", path_name);
      else if(create_dir(path_name) == -1)
	asfPrintError("Can't generate output directory (%s).\n", path_name);
      char *configFile =
	(char *) MALLOC(sizeof(char)*(strlen(path_name)+15));
      sprintf(configFile, "%s%cconfig.txt", path_name, DIR_SEPARATOR);
      FILE *fpConfig = FOPEN(configFile, "w");
      fprintf(fpConfig, "Nrow\n%d\n", md->general->line_count);
      fprintf(fpConfig, "---------\nNcol\n%d\n", md->general->sample_count);
      fprintf(fpConfig, "---------\nPolarCase\nmonostatic\n");
      fprintf(fpConfig, "---------\nPolarType\nfull\n");
      FCLOSE(fpConfig);
      FREE(configFile);
      FREE(path);
      FREE(dirName);
      FREE(fileName);
    }

    if (md->general->image_data_type == POLARIMETRIC_DECOMPOSITION)
      strcpy(decomposition, band_name[band_count-1]);

    // We treat polarimetric decompositions in a similar way. The output file
    // name becomes the name of an output directory again. The actual file
    // names can be extracted from the bands string.
    if (md->general->image_data_type == POLARIMETRIC_DECOMPOSITION &&
	md->general->band_count != 1 && format == POLSARPRO_HDR) {
      char *dirName = (char *) MALLOC(sizeof(char)*1024);
      char *fileName = (char *) MALLOC(sizeof(char)*1024);
      split_dir_and_file(output_file_name, dirName, fileName);
      char *path = get_dirname(output_file_name);
      if (strlen(dirName) <= 0) {
	path = g_get_current_dir();
	sprintf(path_name, "%s%c%s",
		path, DIR_SEPARATOR, output_file_name);
      }
      else
	sprintf(path_name, "%s%c%s",
		dirName, DIR_SEPARATOR, fileName);
      if (is_dir(path_name))
	asfPrintError("Output directory (%s) already exists.\n", path_name);
      else if(create_dir(path_name) == -1)
	asfPrintError("Can't generate output directory (%s).\n", path_name);
      char *configFile =
	(char *) MALLOC(sizeof(char)*(strlen(path_name)+15));
      sprintf(configFile, "%s%cconfig.txt", path_name, DIR_SEPARATOR);
      FILE *fpConfig = FOPEN(configFile, "w");
      fprintf(fpConfig, "Nrow\n%d\n", md->general->line_count);
      fprintf(fpConfig, "---------\nNcol\n%d\n", md->general->sample_count);
      fprintf(fpConfig, "---------\nPolarCase\nmonostatic\n");
      fprintf(fpConfig, "---------\nPolarType\nfull\n");
      FCLOSE(fpConfig);
      FREE(configFile);
      FREE(path);
      FREE(dirName);
      FREE(fileName);
    }

    // store the names of the generated files here
    *noutputs = 0;
    *output_names = MALLOC(sizeof(char*) * band_count);

    int kk;
    int is_colormap_band;

    for (kk=0; kk<band_count; kk++) {
      if (band_name[kk]) {
        is_colormap_band = FALSE;
        // two ways we can be applying a colormap to this band:
        //  (1) the metadata has an embedded colormap, and it's band_id
        //      is this band.
        //  (2) user used the "-lut" option -- we have the !md->colormap
        //      here to avoid thinking we've got -lut when it was really
        //      just the md->colormap (which sets have_look_up_table, above)
        int is_polsarpro =
          (md->general->image_data_type == POLARIMETRIC_IMAGE ||
	   md->general->image_data_type == POLARIMETRIC_SEGMENTATION ||
	   md->general->image_data_type == POLARIMETRIC_DECOMPOSITION ||
	   md->general->image_data_type == POLARIMETRIC_PARAMETER ||
	   (md->general->image_data_type >= POLARIMETRIC_C2_MATRIX &&
	    md->general->image_data_type <= POLARIMETRIC_T4_MATRIX)) ? 1 : 0;
        if (md->general->image_data_type == POLARIMETRIC_PARAMETER &&
	    md->colormap)
	  is_colormap_band = TRUE;
	else if ((md->colormap &&
		  strcmp_case(band_name[kk], md->colormap->band_id)==0) ||
		 (!md->colormap && have_look_up_table &&
		  md->general->data_type == BYTE) ||
		 (!md->colormap && have_look_up_table &&
		  md->general->data_type != BYTE && sample_mapping != NONE)) {
	  is_colormap_band = TRUE;
	  sample_mapping = is_polsarpro ? TRUNCATE : sample_mapping;
	}
	// skip the 'AMP' band if we have POlSARPro data and the user wants
	// to apply a LUT
	if (strcmp_case(band_name[kk], "AMP") == 0 && is_polsarpro  &&
	    band_count > 1)
	  continue;

        if (format == POLSARPRO_HDR) {
          is_colormap_band = FALSE;
          sample_mapping = NONE;
        }

        if (have_look_up_table && is_colormap_band) {
          asfPrintStatus("\nApplying %s color look up table...\n\n", look_up_table_name);
        }

        out_file = (char *) MALLOC(sizeof(char)*1024);
        strcpy(out_file, output_file_name);

	// We enforce a byte conversion using truncate for polarimetric segmentation, regardless of
	// applying a look up table
	if (md->general->image_data_type == POLARIMETRIC_SEGMENTATION &&
	    md->colormap)
	  sample_mapping = TRUNCATE;

        // Initialize the selected format
        // NOTE: For PolSARpro, the first band is amplitude and should be
        // written out as a single-band greyscale image while the second
        // band is a classification and should be written out as color ...
        // and for TIFF formats, as a palette color tiff.
        // The only exception to this rule are polarimetric matrices
        if (md->general->image_data_type >= POLARIMETRIC_C2_MATRIX &&
	    md->general->image_data_type <= POLARIMETRIC_T4_MATRIX &&
	    md->general->band_count != 1) {
            int ll, found_band = FALSE;
            int band_count;
            if (strcmp(matrix, "T3") == 0)
              band_count = 9;
            if (strcmp(matrix, "T4") == 0)
              band_count = 16;
            if (strcmp(matrix, "C2") == 0)
              band_count = 4;
            if (strcmp(matrix, "C3") == 0)
              band_count = 9;
            if (strcmp(matrix, "C4") == 0)
              band_count = 16;
            for (ll=0; ll<band_count; ll++) {
              if (strcmp(matrix, "T3") == 0 &&
                strncmp(band_name[kk], t3_matrix[ll],
                strlen(band_name[kk])) == 0)
                found_band = TRUE;
              else if (strcmp(matrix, "T4") == 0 &&
                strncmp(band_name[kk], t4_matrix[ll],
                strlen(band_name[kk])) == 0)
                found_band = TRUE;
              else if (strcmp(matrix, "C2") == 0 &&
                strncmp(band_name[kk], c2_matrix[ll],
                strlen(band_name[kk])) == 0)
                found_band = TRUE;
              else if (strcmp(matrix, "C3") == 0 &&
                strncmp(band_name[kk], c3_matrix[ll],
                strlen(band_name[kk])) == 0)
                found_band = TRUE;
              else if (strcmp(matrix, "C4") == 0 &&
                strncmp(band_name[kk], c4_matrix[ll],
                strlen(band_name[kk])) == 0)
                found_band = TRUE;
            }
            if (!found_band)
              continue;
	    if (format == POLSARPRO_HDR) { // output goes to directory
	      sprintf(out_file, "%s%c%s",
		      path_name, DIR_SEPARATOR, band_name[kk]);
	    }
	    else { // individual file names
	      if (strcmp_case(md->general->sensor, "UAVSAR") == 0 &&
		  strcmp_case(md->general->sensor_name, "POLSAR") == 0) {

		char mode[5];
		if (strcmp_case(md->general->mode, "GRD") == 0)
		  strcpy(mode, "grd");
		else if (strcmp_case(md->general->mode, "MLC") == 0)
		  strcpy(mode, "mlc");

		if (strcmp(mode, "grd") == 0 || strcmp(mode, "mlc") == 0) {
		  if (strcmp_case(band_name[kk], "C11") == 0)
		    sprintf(out_file, "%s_%sHHHH", output_file_name, mode);
		  else if (strcmp_case(band_name[kk], "C22") == 0)
		    sprintf(out_file, "%s_%sHVHV", output_file_name, mode);
		  else if (strcmp_case(band_name[kk], "C33") == 0)
		    sprintf(out_file, "%s_%sVVVV", output_file_name, mode);
		  else if (strcmp_case(band_name[kk], "C12_real") == 0)
		    sprintf(out_file, "%s_%sHHHV_real", output_file_name, mode);
		  else if (strcmp_case(band_name[kk], "C12_imag") == 0)
		    sprintf(out_file, "%s_%sHHHV_imag", output_file_name, mode);
		  else if (strcmp_case(band_name[kk], "C13_real") == 0)
		    sprintf(out_file, "%s_%sHHVV_real", output_file_name, mode);
		  else if (strcmp_case(band_name[kk], "C13_imag") == 0)
		    sprintf(out_file, "%s_%sHHVV_imag", output_file_name, mode);
		  else if (strcmp_case(band_name[kk], "C23_real") == 0)
		    sprintf(out_file, "%s_%sHVVV_real", output_file_name, mode);
		  else if (strcmp_case(band_name[kk], "C23_imag") == 0)
		    sprintf(out_file, "%s_%sHVVV_imag", output_file_name, mode);
		}
		else if (strcmp(mode, "hgt") == 0)
		  sprintf(out_file, "%s_hgt", output_file_name);
	      }
	    }

	}
        else if (md->general->image_data_type == POLARIMETRIC_STOKES_MATRIX) {
	  if (strcmp_case(md->general->sensor, "UAVSAR") == 0 &&
	      strcmp_case(md->general->sensor_name, "POLSAR") == 0 &&
	      strcmp_case(md->general->mode, "DAT") == 0)
	    sprintf(out_file, "%s_dat%s", output_file_name, band_name[kk]);
	}
	else if (md->general->image_data_type == DEM) {
	  if (strcmp_case(md->general->sensor, "UAVSAR") == 0 &&
	      strcmp_case(md->general->sensor_name, "POLSAR") == 0 &&
	      strcmp_case(md->general->mode, "HGT") == 0) {
	    char *tmp = stripExt(output_file_name);
            sprintf(out_file, "%s_hgt.tif", tmp);
            FREE(tmp);
	  }
	}
        else if (md->general->image_data_type == POLARIMETRIC_DECOMPOSITION &&
          md->general->band_count != 1) {
            int ll, found_band = FALSE;
            int band_count;
            if (strcmp(decomposition, "Freeman2_Vol") == 0)
              band_count = 2;
            else if (strcmp(decomposition, "Freeman_Vol") == 0)
              band_count = 3;
            else if (strcmp(decomposition, "VanZyl3_Vol") == 0)
              band_count = 3;
            else if (strcmp(decomposition, "Yamaguchi3_Vol") == 0)
              band_count = 3;
            else if (strcmp(decomposition, "Yamaguchi4_Vol") == 0)
              band_count = 4;
            else if (strcmp(decomposition, "Krogager_Ks") == 0)
              band_count = 3;
            else if (strcmp(decomposition, "TSVM_alpha_s3") == 0)
              band_count = 3;
            else if (strcmp(decomposition, "TSVM_phi_s3") == 0)
              band_count = 3;
            else if (strcmp(decomposition, "TSVM_tau_m3") == 0)
              band_count = 3;
            else if (strcmp(decomposition, "TSVM_psi3") == 0)
              band_count = 3;
            else if (strcmp(decomposition, "TSVM_psi") == 0)
              band_count = 4;
            for (ll=0; ll<band_count; ll++) {
              if (strcmp(decomposition, "Freeman2_Vol") == 0 &&
                strncmp(band_name[kk], freeman2_decomposition[ll],
                strlen(band_name[kk])) == 0)
                found_band = TRUE;
              else if (strcmp(decomposition, "Freeman_Vol") == 0 &&
                strncmp(band_name[kk], freeman3_decomposition[ll],
                strlen(band_name[kk])) == 0)
                found_band = TRUE;
              else if (strcmp(decomposition, "VanZyl3_Vol") == 0 &&
                strncmp(band_name[kk], vanZyl3_decomposition[ll],
                strlen(band_name[kk])) == 0)
                found_band = TRUE;
              else if (strcmp(decomposition, "Yamaguchi3_Vol") == 0 &&
                strncmp(band_name[kk], yamaguchi3_decomposition[ll],
                strlen(band_name[kk])) == 0)
                found_band = TRUE;
              else if (strcmp(decomposition, "Yamaguchi4_Vol") == 0 &&
                strncmp(band_name[kk], yamaguchi4_decomposition[ll],
                strlen(band_name[kk])) == 0)
                found_band = TRUE;
              else if (strcmp(decomposition, "Krogager_Ks") == 0 &&
                strncmp(band_name[kk], krogager_decomposition[ll],
                strlen(band_name[kk])) == 0)
                found_band = TRUE;
              else if (strcmp(decomposition, "TSVM_alpha_s3") == 0 &&
                strncmp(band_name[kk], touzi1_decomposition[ll],
                strlen(band_name[kk])) == 0)
                found_band = TRUE;
              else if (strcmp(decomposition, "TSVM_phi_s3") == 0 &&
                strncmp(band_name[kk], touzi2_decomposition[ll],
                strlen(band_name[kk])) == 0)
                found_band = TRUE;
              else if (strcmp(decomposition, "TSVM_tau_m3") == 0 &&
                strncmp(band_name[kk], touzi3_decomposition[ll],
                strlen(band_name[kk])) == 0)
                found_band = TRUE;
              else if (strcmp(decomposition, "TSVM_psi3") == 0 &&
                strncmp(band_name[kk], touzi4_decomposition[ll],
                strlen(band_name[kk])) == 0)
                found_band = TRUE;
              else if (strcmp(decomposition, "TSVM_psi") == 0 &&
                strncmp(band_name[kk], touzi5_decomposition[ll],
                strlen(band_name[kk])) == 0)
                found_band = TRUE;
            }
            if (!found_band)
              continue;
            sprintf(out_file, "%s%c%s",
              path_name, DIR_SEPARATOR, band_name[kk]);

          }
        else if (md->general->image_data_type == POLARIMETRIC_SEGMENTATION ||
          md->general->image_data_type == POLARIMETRIC_PARAMETER)
          append_band_ext(base_name, out_file, NULL);
        else {
          if (band_count > 1) {
	    if (strstr(band_name[kk], "INTERFEROGRAM_PHASE") &&
		is_colormap_band)
	      append_band_ext(base_name, out_file, "INTERFEROGRAM_RGB");
	    else
	      append_band_ext(base_name, out_file, band_name[kk]);
	  }
          else
            append_band_ext(base_name, out_file, NULL);
        }

        if (strcmp(band_name[0], MAGIC_UNSET_STRING) != 0)
          asfPrintStatus("\nWriting band '%s' ...\n", band_name[kk]);

        if (format == TIF || format == GEOTIFF) {
          is_geotiff = (format == GEOTIFF) ? 1 : 0;
          append_ext_if_needed (out_file, ".tif", ".tiff");
          if (is_colormap_band && strlen(lut_file) > 0) {
            //sample_mapping = TRUNCATE;
            rgb = FALSE;
            initialize_tiff_file(&otif, &ogtif, out_file,
              metadata_file_name, is_geotiff,
              sample_mapping, rgb,
              &palette_color_tiff, band_name,
              lut_file, TRUE);
          }
          else {
            initialize_tiff_file(&otif, &ogtif, out_file,
              metadata_file_name, is_geotiff,
              sample_mapping, rgb,
              &palette_color_tiff, band_name,
              NULL, FALSE);
          }
        }
        else if (format == JPEG) {
          append_ext_if_needed (out_file, ".jpg", ".jpeg");
          if (is_colormap_band) {
            initialize_jpeg_file(out_file, md,
              &ojpeg, &cinfo, TRUE);
          }
          else {
            initialize_jpeg_file(out_file, md,
              &ojpeg, &cinfo, rgb);
          }
        }
        else if (format == PNG) {
          append_ext_if_needed (out_file, ".png", NULL);
          if (is_colormap_band) {
            initialize_png_file(out_file, md,
              &opng, &png_ptr, &png_info_ptr, TRUE);
          }
          else {
            initialize_png_file(out_file, md,
              &opng, &png_ptr, &png_info_ptr, rgb);
          }
        }
        else if (format == PNG_ALPHA) {
          append_ext_if_needed (out_file, ".png", NULL);
          initialize_png_file_ext(out_file, md,
            &opng, &png_ptr, &png_info_ptr, FALSE, TRUE);
        }
        else if (format == PNG_GE) {
          append_ext_if_needed (out_file, ".png", NULL);
          initialize_png_file_ext(out_file, md,
            &opng, &png_ptr, &png_info_ptr, 1, 2);
        }
        else if (format == PGM) {
          append_ext_if_needed (out_file, ".pgm", ".pgm");
          initialize_pgm_file(out_file, md, &opgm);
        }
        else if (format == POLSARPRO_HDR) {
          append_ext_if_needed (out_file, ".bin", NULL);
          initialize_polsarpro_file(out_file, md, &ofp);
        }
	else if (format == HDF) {
	  append_ext_if_needed (out_file, ".h5", NULL);
	  h5 = initialize_h5_file(out_file, md);
	  hdf = (float *)
	    MALLOC(sizeof(float)*md->general->line_count*
		   md->general->sample_count);
	}
        else if (format == NC) {
          append_ext_if_needed (out_file, ".nc", NULL);
	  netcdf = initialize_netcdf_file(out_file, md);
	  nc = (float *)
	    MALLOC(sizeof(float)*md->general->line_count*
		   md->general->sample_count);
	}
        else {
          asfPrintError("Impossible: unexpected format %s\n", format2str(format));
        }

        (*output_names)[*noutputs] = STRDUP(out_file);
        *noutputs += 1;

        // Determine which channel to read
        int channel;
        if (md->general->image_data_type >  POLARIMETRIC_IMAGE &&
	    md->general->image_data_type <= POLARIMETRIC_T4_MATRIX)
          channel = kk;
        else {
          if (md->general->band_count == 1)
            channel = 0;
          else
            channel = get_band_number(bands, band_count, band_name[kk]);
          asfRequire(channel >= 0 && channel <= MAX_BANDS,
            "Band number out of range\n");
        }

        int sample_count = md->general->sample_count;
        int offset = md->general->line_count;

        // Get the statistics if necessary
        channel_stats_t stats;
        stats.hist = NULL; stats.hist_pdf = NULL;

        if (sample_mapping != NONE && sample_mapping != TRUNCATE)
        {
          asfRequire (sizeof(unsigned char) == 1,
            "Size of the unsigned char data type on this machine is "
            "different than expected.\n");
          if (md->stats                  &&
            md->stats->band_count > 0  &&
            meta_is_valid_double(md->stats->band_stats[channel].mean) &&
            meta_is_valid_double(md->stats->band_stats[channel].min) &&
            meta_is_valid_double(md->stats->band_stats[channel].max) &&
            meta_is_valid_double(md->stats->band_stats[channel].std_deviation) &&
            sample_mapping != HISTOGRAM_EQUALIZE)
          {
            asfPrintStatus("Using metadata statistics - skipping stats computations.\n");
            stats.min  = md->stats->band_stats[channel].min;
            stats.max  = md->stats->band_stats[channel].max;
            stats.mean = md->stats->band_stats[channel].mean;
            stats.standard_deviation = md->stats->band_stats[channel].std_deviation;
            stats.hist = NULL;
          }
          else {
            asfPrintStatus("Gathering statistics ...\n");
            calc_stats_from_file(image_data_file_name, band_name[kk],
              md->general->no_data,
              &stats.min, &stats.max, &stats.mean,
              &stats.standard_deviation, &stats.hist);
          }
          if (sample_mapping == TRUNCATE && !have_look_up_table) {
            if (stats.mean >= 255)
              asfPrintWarning("The image contains HIGH values and will turn out very\n"
              "bright or all-white.\n  Min : %f\n  Max : %f\n  Mean: %f\n"
              "=> Consider using a sample mapping method other than TRUNCATE\n",
              stats.min, stats.max, stats.mean);
            if (stats.mean < 10)
              asfPrintWarning("The image contains LOW values and will turn out very\n"
              "dark or all-black.\n  Min : %f\n  Max : %f\n  Mean: %f\n"
              "=> Consider using a sample mapping method other than TRUNCATE\n",
              stats.min, stats.max, stats.mean);
          }
          if (sample_mapping == SIGMA)
          {
            double omin = stats.mean - 2*stats.standard_deviation;
            double omax = stats.mean + 2*stats.standard_deviation;
            if (omin > stats.min) stats.min = omin;
            if (omax < stats.max) stats.max = omax;
          }
          if ( sample_mapping == HISTOGRAM_EQUALIZE ) {
            stats.hist_pdf = gsl_histogram_pdf_alloc (256); //NUM_HIST_BINS);
            gsl_histogram_pdf_init (stats.hist_pdf, stats.hist);
          }
        }

        // Write the output image
        FILE *fp = FOPEN(image_data_file_name, "rb");
        float *float_line = (float *) MALLOC(sizeof(float) * sample_count);
        unsigned char *byte_line = MALLOC(sizeof(unsigned char) * sample_count);

        asfPrintStatus("Writing output file...\n");
        if (is_colormap_band)
        { // Apply look up table
          for (ii=0; ii<md->general->line_count; ii++ ) {
            if ((md->optical || md->general->data_type == BYTE) &&
		md->general->image_data_type != POLARIMETRIC_PARAMETER) {
              get_byte_line(fp, md, ii+channel*offset, byte_line);
              if (format == TIF || format == GEOTIFF)
                write_tiff_byte2lut(otif, byte_line, ii, sample_count,
                lut_file);
              else if (format == JPEG)
                write_jpeg_byte2lut(ojpeg, byte_line, &cinfo, sample_count,
                lut_file);
              else if (format == PNG || format == PNG_ALPHA || format == PNG_GE)
                write_png_byte2lut(opng, byte_line, png_ptr, png_info_ptr,
                sample_count, lut_file);
              else
                asfPrintError("Impossible: unexpected format %s\n", format2str(format));
            }
            else {
              // Force a sample mapping of TRUNCATE for PolSARpro classifications
              // (They contain low integer values stored in floats ...contrast
              //  expansion will break the look up in the look up table.)
              get_float_line(fp, md, ii+channel*offset, float_line);
              if (format == TIF || format == GEOTIFF)
                // Unlike the other graphics file formats, the TIFF file uses an embedded
                // colormap (palette) and therefore each pixel should be a single byte value
                // where each byte value is an index into the colormap.  The other graphics
                // file formats use interlaced RGB lines and no index or colormap instead.
                write_tiff_float2byte(otif, float_line, stats,
                //is_colormap_band ? TRUNCATE : sample_mapping,
                sample_mapping,
                md->general->no_data, ii, sample_count);
              else if (format == JPEG)
                // Use lut to write an RGB line to the file
                write_jpeg_float2lut(ojpeg, float_line, &cinfo, stats,
                //is_colormap_band ? TRUNCATE : sample_mapping,
                sample_mapping,
                md->general->no_data,
                sample_count, lut_file);
              else if (format == PNG || format == PNG_ALPHA || format == PNG_GE)
                // Use lut to write an RGB line to the file
                write_png_float2lut(opng, float_line, png_ptr, png_info_ptr,
                stats,
                //is_colormap_band ? TRUNCATE : sample_mapping,
                sample_mapping,
                md->general->no_data,
                sample_count, lut_file);
              else if (format == PGM) {
                // Can't put color in a PGM file, so map it to greyscale and write that
                write_pgm_float2byte(opgm, float_line, stats,
                  //is_colormap_band ? TRUNCATE : sample_mapping,
                  sample_mapping,
                  md->general->no_data, sample_count);
              }
              else
                asfPrintError("Impossible: unexpected format %s\n", format2str(format));
            }
            asfLineMeter(ii, md->general->line_count);
          }
        }
        else {
          // Regular old single band image (no look up table applied)
          for (ii=0; ii<md->general->line_count; ii++ ) {
            if (md->optical || md->general->data_type == BYTE) {
              get_byte_line(fp, md, ii+channel*offset, byte_line);
              if (format == TIF || format == GEOTIFF)
                write_tiff_byte2byte(otif, byte_line, stats, sample_mapping,
                sample_count, ii);
              else if (format == JPEG)
                write_jpeg_byte2byte(ojpeg, byte_line, stats, sample_mapping,
                &cinfo, sample_count);
              else if (format == PNG)
                write_png_byte2byte(opng, byte_line, stats, sample_mapping,
                png_ptr, png_info_ptr, sample_count);
              else if (format == PNG_ALPHA) {
                asfPrintError("PNG_ALPHA not supported.\n");
              }
              else if (format == PNG_GE)
                write_png_byte2rgbalpha(opng, byte_line, stats, sample_mapping,
                                        png_ptr, png_info_ptr, sample_count);
              else if (format == PGM)
                write_pgm_byte2byte(opgm, byte_line, stats, sample_mapping,
                sample_count);
              else
                asfPrintError("Impossible: unexpected format %s\n", format2str(format));
            }
            else if (sample_mapping == NONE && !is_colormap_band) {
              get_float_line(fp, md, ii+channel*offset, float_line);
              if (format == GEOTIFF || format == TIF) {
		if (md->general->data_type == REAL32)
		  write_tiff_float2float(otif, float_line, ii);
		else if (md->general->data_type == INTEGER16)
		  write_tiff_float2int(otif, float_line, ii,
				       md->general->sample_count);
	      }
              else if (format == POLSARPRO_HDR) {
                int sample;
                for (sample=0; sample<sample_count; sample++)
                  ieee_lil32(float_line[sample]);
                fwrite(float_line,4,sample_count,ofp);
              }
	      else if (format == HDF) {
		int sample;
		for (sample=0; sample<sample_count; sample++)
		  hdf[ii*sample_count+sample] = float_line[sample];
	      }
	      else if (format == NC) {
		int sample;
		for (sample=0; sample<sample_count; sample++) {
		  nc[ii*sample_count+sample] = float_line[sample];
		}
	      }
              else
                asfPrintError("Impossible: unexpected format %s\n", format2str(format));
            }
            else {
              get_float_line(fp, md, ii+channel*offset, float_line);
              if (format == TIF || format == GEOTIFF)
                write_tiff_float2byte(otif, float_line, stats,
                //is_colormap_band ? TRUNCATE : sample_mapping,
                sample_mapping,
                md->general->no_data, ii, sample_count);
              else if (format == JPEG)
                write_jpeg_float2byte(ojpeg, float_line, &cinfo, stats,
                //is_colormap_band ? TRUNCATE : sample_mapping,
                sample_mapping,
                md->general->no_data,
                sample_count);
              else if (format == PNG || format == PNG_ALPHA || format == PNG_GE)
                write_png_float2byte(opng, float_line, png_ptr, png_info_ptr,
                stats,
                //is_colormap_band ? TRUNCATE : sample_mapping,
                sample_mapping,
                md->general->no_data,
                sample_count);
              else if (format == PGM)
                write_pgm_float2byte(opgm, float_line, stats,
                //is_colormap_band ? TRUNCATE : sample_mapping,
                sample_mapping,
                md->general->no_data, sample_count);
              else if (format == POLSARPRO_HDR) {
                int sample;
                for (sample=0; sample<sample_count; sample++)
                  ieee_lil32(float_line[sample]);
                fwrite(float_line,4,sample_count,ofp);
              }
              else
                asfPrintError("Impossible: unexpected format %s\n", format2str(format));
            }
            asfLineMeter(ii, md->general->line_count);
          } // End for each line
        } // End if multi or single band
        // Free memory
        FREE(float_line);
        FREE(byte_line);
        if (stats.hist) gsl_histogram_free(stats.hist);
        if (stats.hist_pdf) gsl_histogram_pdf_free(stats.hist_pdf);

        // Finalize the chosen format
        if (format == TIF || format == GEOTIFF)
          finalize_tiff_file(otif, ogtif, is_geotiff);
        else if (format == JPEG)
          finalize_jpeg_file(ojpeg, &cinfo);
        else if (format == PNG || format == PNG_ALPHA || format == PNG_GE)
          finalize_png_file(opng, png_ptr, png_info_ptr);
        else if (format == PGM)
          finalize_ppm_file(opgm);
        else if (format == POLSARPRO_HDR)
          FCLOSE(ofp);
	else if (format == HDF) {
	  asfPrintStatus("Storing band '%s' ...\n", band_name[kk]);
	  char dataset[50];
	  sprintf(dataset, "/data/%s_AMPLITUDE_IMAGE", band_name[kk]);
	  hid_t h5_data = H5Dopen(h5->file, dataset, H5P_DEFAULT);
	  H5Dwrite(h5_data, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL,
		   H5P_DEFAULT, hdf);
	  H5Dclose(h5_data);
	}
	else if (format == NC) {
	  asfPrintStatus("Storing band '%s' ...\n", band_name[kk]);
	  nc_put_var_float(netcdf->ncid, netcdf->var_id[kk], &nc[0]);
	}

        FCLOSE(fp);
      }
    } // End for each band (kk is band number)

    if (hdf) {
      finalize_h5_file(h5);
      FREE(hdf);
    }

    if (nc) {
      finalize_netcdf_file(netcdf, md);
      FREE(nc);
    }
    if (free_band_names) {
      for (ii=0; ii<band_count; ++ii)
        FREE(band_name[ii]);
      FREE(band_name);
    }
    FREE(path_name);
    FREE(matrix);
    FREE(decomposition);
    FREE(out_file);
  }

  if (lut_file && strstr(lut_file, "tmp_lut_file.lut") && fileExists(lut_file)) {
    // If a temporary look-up table was generated (from an embedded colormap in the
    // metadata) then remove it now.
    remove(lut_file);
  }
  FREE(lut_file);
  meta_free (md);
}

void append_band_names(char **band_names, int rgb, char *citation, int palette_color_tiff)
{
  char band_name[256];
  int i=0;
  sprintf(citation, "%s, %s: ", citation, BAND_ID_STRING);
  if (band_names) {
    if (rgb && !palette_color_tiff) {
      // RGB tiffs that do not use a color index (palette) have 3 bands, but
      // palette color tiffs have a single band and an RGB look-up table (TIFFTAG_COLORMAP)
      //
      // When the image uses a look-up table, then meta->general->bands lists the look-up table
      // name rather than a list of individual band names.  band_names[] will therefore only have
      // a single entry.
      //
      // When a color image does not use a look-up table, then meta->general->bands contains
      // the list of band names, one for each band, separated by commas.  It's safe to expect
      // the band_names[] array to contain 3 bands in this case.
      for (i=0; i<2; i++) {
        // First 2 bands have a comma after the band name
        if (band_names[i] != NULL && strlen(band_names[i]) > 0 &&
            strncmp(band_names[i], MAGIC_UNSET_STRING, strlen(MAGIC_UNSET_STRING)) != 0)
        {
          sprintf(band_name, "%s,", strncmp("IGNORE", uc(band_names[i]), 6) == 0 ? "Empty" : band_names[i]);
          strcat(citation, band_name);
        }
        else {
          sprintf(band_name, "%02d,", i + 1);
          strcat(citation, band_name);
        }
      }
      if (band_names[i] != NULL && strlen(band_names[i]) > 0 &&
          strncmp(band_names[i], MAGIC_UNSET_STRING, strlen(MAGIC_UNSET_STRING)) != 0)
      {
        strcat(citation, strncmp("IGNORE", uc(band_names[i]), 6) == 0 ? "Empty" : band_names[i]);
      }
      else {
        sprintf(band_name, "%02d", i + 1);
        strcat(citation, band_name);
      }
    }
    else {
        // Single band image or a palette color image
        if (palette_color_tiff) {
            strcat(citation, band_names[0]);
        }
        else {
            if (band_names[0] != NULL && strlen(band_names[0]) > 0 &&
                strncmp(band_names[i], MAGIC_UNSET_STRING, strlen(MAGIC_UNSET_STRING)) != 0)
            {
                strcat(citation, strncmp("IGNORE", uc(band_names[0]), 6) == 0 ? "Empty" : band_names[0]);
            }
            else {
                strcat(citation, "01");
            }
        }
    }
  }
  else {
    if (rgb && !palette_color_tiff)
      strcat(citation, "01,02,03");
    else
      strcat(citation, "01");
  }
}

// lut_to_tiff_palette() converts an ASF-style look-up table (text file) into
// a TIFF standard RGB palette (indexed color map for TIFFTAG_COLORMAP)
int lut_to_tiff_palette(unsigned short **colors, int map_size, char *look_up_table_name)
{
    int i, max_lut_dn;
    unsigned char *lut = NULL;
    float r, g, b;

    asfRequire(map_size >= 1, "TIFF palette color map size less than 1 element\n");
    asfRequire(look_up_table_name != NULL && strlen(look_up_table_name) > 0,
               "Invalid look up table name\n");

    // Use CALLOC so the entire look up table is initialized to zero
    lut = (unsigned char *)CALLOC(MAX_LUT_DN * 3, sizeof(unsigned char));

    // Read the look up table from the file.  It will be 3-color and have MAX_LUT_DN*3 elements
    // in the array, in packed format <rgbrgbrgb...rgb>, and values range from 0 to 255
    max_lut_dn = read_lut(look_up_table_name, lut);
    if (max_lut_dn > map_size) {
        FREE(lut);
        asfPrintError("Look-up table too large (%d) for TIFF.  Maximum TIFF\n"
                "look-up table size for the data type is %d elements long.\n", max_lut_dn, map_size);
    }
    *colors = (unsigned short *)_TIFFmalloc(sizeof(unsigned short) * 3 * map_size);
    asfRequire(*colors != NULL, "Could not allocate TIFF palette.\n");
    for (i = 0; i < 3 * map_size; i++) (*colors)[i] = (unsigned short)0; // Init to all zeros

    // Normalize the look-up table values into the range specified by the TIFF standard
    // (0 through 65535 ...the maximum unsigned short value)
    for (i=0; i<max_lut_dn; i++) {
        // TIFF color map structure is a one-row array, all the reds, then all the
        // greens, then all the blues, i.e. <all reds><all greens><all blues>, each
        // section 'map_size' elements long
        //
        // Grab rgb values from the lut
        r = (float)lut[i*3  ];
        g = (float)lut[i*3+1];
        b = (float)lut[i*3+2];

        // Normalize the lut values to the 0-65535 range as specified by the TIFF standard for
        // color maps / palettes
        (*colors)[i             ] = (unsigned short) ((r/(float)MAX_RGB)*(float)USHORT_MAX + 0.5);
        (*colors)[i +   map_size] = (unsigned short) ((g/(float)MAX_RGB)*(float)USHORT_MAX + 0.5);
        (*colors)[i + 2*map_size] = (unsigned short) ((b/(float)MAX_RGB)*(float)USHORT_MAX + 0.5);
    }

    return max_lut_dn;
}

// Assumes the color map is made from unsigned shorts (uint16 or equiv).  a) This is mandated
// by v6 of the TIFF standard regardless of data type in the tiff, b) The only valid
// data types for a colormap TIFF is i) 4-bit unsigned integer, or ii) 8-bit unsigned integer,
// and c) the values in a TIFF colormap range from 0 to 65535 (max uint16) and must be normalized
// to 0-255 as for display (the range 0-255 is normalize to 0-65535 when creating the colormap
// in the first place.)
void dump_palette_tiff_color_map(unsigned short *colors, int map_size)
{
    int i;
    asfRequire(map_size <= 256, "Map size too large.\n");

    fprintf(stderr, "\n\nColor Map (DN: red  green  blue):\n");
    for (i=0; i<map_size; i++){
        fprintf(stderr, "%d:\t%d\t%d\t%d\n", i,
                (int)((float)colors[i +          0]*((float)MAX_RGB/(float)USHORT_MAX) + 0.5),
                (int)((float)colors[i +   map_size]*((float)MAX_RGB/(float)USHORT_MAX) + 0.5),
                (int)((float)colors[i + 2*map_size]*((float)MAX_RGB/(float)USHORT_MAX) + 0.5));
    }
}

int meta_colormap_to_tiff_palette(unsigned short **tiff_palette, int *byte_image, meta_colormap *colormap)
{
    int i, size;
    unsigned short r, g, b;
    meta_colormap *cm = colormap; // Convenience ptr

    asfRequire(colormap != NULL, "Unallocated colormap.\n");
    size = cm->num_elements;
    *tiff_palette = (unsigned short *)CALLOC(3*size, sizeof(unsigned short));

    // A TIFF palette is a one dimensional array ...all the reds, then all the greens, then all the blues
    // Create TIFF palette by normalizing 0-255 range into 0-65535 and storing in the band sequential
    // array.
    for (i=0; i<size; i++) {
        r = cm->rgb[i].red;
        g = cm->rgb[i].green;
        b = cm->rgb[i].blue;
        (*tiff_palette)[i +      0] = (unsigned short) (((float)r/(float)MAX_RGB)*(float)USHORT_MAX + 0.5);
        (*tiff_palette)[i +   size] = (unsigned short) (((float)g/(float)MAX_RGB)*(float)USHORT_MAX + 0.5);
        (*tiff_palette)[i + 2*size] = (unsigned short) (((float)b/(float)MAX_RGB)*(float)USHORT_MAX + 0.5);
    }

    return size;
}

char *sample_mapping2string(scale_t sample_mapping)
{
    switch(sample_mapping) {
        case TRUNCATE:
            return "TRUNCATE";
            break;
        case MINMAX:
            return "MIN-MAX";
            break;
        case SIGMA:
            return "2-SIGMA";
            break;
        case HISTOGRAM_EQUALIZE:
            return "HISTOGRAM EQUALIZE";
            break;
        case NONE:
            return "NONE";
            break;
        default:
            return "UNKNOWN or UNRECOGNIZED";
            break;
    }
}

void colormap_to_lut_file(meta_colormap *cm, const char *lut_file)
{
  int i;
  char line[256];

  FILE *fp = FOPEN(lut_file, "wt");
  fprintf(fp, "# Temporary look-up table file for asf_export\n");
  fprintf(fp, "# Look-up table     : %s\n", cm->look_up_table);
  fprintf(fp, "# Number of elements: %d\n", cm->num_elements);
  fprintf(fp, "# Index   Red   Green   Blue\n");
  for (i=0; i<cm->num_elements; i++) {
    sprintf(line, "%d %d %d %d\n",
            i, cm->rgb[i].red, cm->rgb[i].green, cm->rgb[i].blue);
    fprintf(fp, line);
  }
  FCLOSE(fp);
}

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